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Report for CCDS1568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1568.1 Public Homo sapiens 1 GUK1 24 110 108 CCDS HistoryNCBI Gene:2987Re-query CCDS DB by CCDS ID:1568.1Re-query CCDS DB by GeneID:2987See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312726.9 ENSP00000317659.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312726.9Link to Ensembl Protein Viewer:ENSP00000317659.4Re-query CCDS DB by Nucleotide ID:ENST00000312726Re-query CCDS DB by Protein ID:ENSP00000317659
Original member Current member EBI ENST00000366716.1 ENSP00000355677.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366716.1Link to Ensembl Protein Viewer:ENSP00000355677.1Re-query CCDS DB by Nucleotide ID:ENST00000366716Re-query CCDS DB by Protein ID:ENSP00000355677
Original member Current member EBI ENST00000366718.5 ENSP00000355679.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366718.5Link to Ensembl Protein Viewer:ENSP00000355679.1Re-query CCDS DB by Nucleotide ID:ENST00000366718Re-query CCDS DB by Protein ID:ENSP00000355679
Original member Current member EBI ENST00000366726.5 ENSP00000355687.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366726.5Link to Ensembl Protein Viewer:ENSP00000355687.1Re-query CCDS DB by Nucleotide ID:ENST00000366726Re-query CCDS DB by Protein ID:ENSP00000355687
Original member Current member EBI ENST00000366730.5 ENSP00000355691.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366730.5Link to Ensembl Protein Viewer:ENSP00000355691.1Re-query CCDS DB by Nucleotide ID:ENST00000366730Re-query CCDS DB by Protein ID:ENSP00000355691
Original member Current member NCBI NM_000858.7 NP_000849.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000858.7Link to Protein Sequence:NP_000849.1Re-query CCDS DB by Nucleotide ID:NM_000858Re-query CCDS DB by Protein ID:NP_000849Link to BLAST:NP_000849.1
Original member Current member NCBI NM_001159391.3 NP_001152863.1 Accepted alive Link to Nucleotide Sequence:NM_001159391.3Link to Protein Sequence:NP_001152863.1Re-query CCDS DB by Nucleotide ID:NM_001159391Re-query CCDS DB by Protein ID:NP_001152863Link to BLAST:NP_001152863.1
Original member Current member NCBI NM_001242839.1 NP_001229768.1 Accepted alive Link to Nucleotide Sequence:NM_001242839.1Link to Protein Sequence:NP_001229768.1Re-query CCDS DB by Nucleotide ID:NM_001242839Re-query CCDS DB by Protein ID:NP_001229768Link to BLAST:NP_001229768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000849.1 197 Q16774-1 197 100% 0 0
NP_001152863.1 197 Q16774-1 197 100% 0 0
NP_001229768.1 197 Q16774-1 197 100% 0 0

Chromosomal Locations for CCDS 1568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 228145513 228145624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228146026 228146067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228146842 228146938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228147406 228147544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228147615 228147699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228148371 228148456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 228148665 228148697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGTCGGGCCCCAGGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAAGAGCACCCTGCTGAAGAGGC
TGCTCCAGGAGCACAGCGGCATCTTTGGCTTCAGCGTGTCCCATACCACGAGGAACCCGAGGCCCGGCGA
GGAGAACGGCAAAGATTACTACTTTGTAACCAGGGAGGTGATGCAGCGTGACATAGCAGCCGGCGACTTC
ATCGAGCATGCCGAGTTCTCGGGGAACCTGTATGGCACGAGCAAGGTGGCGGTGCAGGCCGTGCAGGCCA
TGAACCGCATCTGTGTGCTGGACGTGGACCTGCAGGGTGTGCGGAACATCAAGGCCACCGATCTGCGGCC
CATCTACATCTCTGTGCAGCCGCCTTCACTGCACGTGCTGGAGCAGCGGCTGCGGCAGCGCAACACTGAA
ACCGAGGAGAGCCTGGTGAAGCGGCTGGCTGCTGCCCAGGCCGACATGGAGAGCAGCAAGGAGCCCGGCC
TGTTTGATGTGGTCATCATTAACGACAGCCTGGACCAGGCCTACGCAGAGCTGAAGGAGGCGCTCTCTGA
GGAAATCAAGAAAGCTCAAAGGACCGGCGCCTGA

Translation (197 aa):
MSGPRPVVLSGPSGAGKSTLLKRLLQEHSGIFGFSVSHTTRNPRPGEENGKDYYFVTREVMQRDIAAGDF
IEHAEFSGNLYGTSKVAVQAVQAMNRICVLDVDLQGVRNIKATDLRPIYISVQPPSLHVLEQRLRQRNTE
TEESLVKRLAAAQADMESSKEPGLFDVVIINDSLDQAYAELKEALSEEIKKAQRTGA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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