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Report for CCDS33639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33639.1 Public Homo sapiens 22 C22orf42 24 110 108 CCDS HistoryNCBI Gene:150297Re-query CCDS DB by CCDS ID:33639.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33639.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382097.4 ENSP00000371529.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382097.4Link to Ensembl Protein Viewer:ENSP00000371529.3Re-query CCDS DB by Nucleotide ID:ENST00000382097Re-query CCDS DB by Protein ID:ENSP00000371529
Original member Current member NCBI NM_001010859.3 NP_001010859.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010859.3Link to Protein Sequence:NP_001010859.1Re-query CCDS DB by Nucleotide ID:NM_001010859Re-query CCDS DB by Protein ID:NP_001010859Link to BLAST:NP_001010859.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010859.1 251 Q6IC83 251 100% 0 0

Chromosomal Locations for CCDS 33639.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 32149540 32149613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32149753 32149780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32150319 32150479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32150992 32151019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32151487 32151551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32152067 32152094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32152562 32152626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32154244 32154318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 32158984 32159215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGGGGAGCAAACTGACTTGCTGCCTGGGCCCCAGCGGGGGCCTCAACTGTGACTGCTGCAGGCCAGATG
TGGGACCCTGCCATGAGTGTGAGATTCCTGAGACTGTGGCAGCCACAGCACCAGCATCCACCACTGCAAA
GCCTGCCAAATTGGATTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTCAGCCTCCCGAAGACGCCG
AAGATGCTGAAGATGTCCAAAGGTTTGGACGCCCGCTCCAAGCGCTGGTTAAAAATAATATGGAGACGGC
ACGGGATTTGGCCTCTAGAAAATATAGGTCCCACTGAAGATGTGCAGGCGTCTGCACACGGCGGTGTGGA
GGAGAATATGACATCAGATATTGAAATACCTGAGGCCAAGCACGACCACCGTCCCACTGAAGATGTGCAG
GTGTCTGCACACGGCGGTGTGGAGGAGAATATAACGTCAGATATTGAAATATCTGAGGCCAAGCACGACC
ACCATTTGGTCGAAGATCTCAGTGAAAGCCTATCTGTCTGTCTTGAAGACTTCATGACATCGGATCTCAG
TGAAAGCCTATCTGTCTCTCTTGAAGACTTCATGACATCAGGTCTCAGTGAAAGCCTATCTGTCTCTCTT
GAAGACCTCATGACACCGGAGATGGCAAAGGAGAGATATGAAGATTACCTCTGCTGGGTTAAGATGGCAC
GGTCTCGGCTCAATGAACCCATCAGCAGCCAGGTTCTAGGACTTCTCCGGCTTTAG

Translation (251 aa):
MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVAATAPASTTAKPAKLDLKAKKAQLMQYLSLPKTP
KMLKMSKGLDARSKRWLKIIWRRHGIWPLENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQ
VSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSL
EDLMTPEMAKERYEDYLCWVKMARSRLNEPISSQVLGLLRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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