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Report for CCDS21244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21244.1 Public Mus musculus 7 Gys1 23 108 98 CCDS HistoryNCBI Gene:14936Re-query CCDS DB by CCDS ID:21244.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21244.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003964.16 ENSMUSP00000003964.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003964.16Link to Ensembl Protein Viewer:ENSMUSP00000003964.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000003964Re-query CCDS DB by Protein ID:ENSMUSP00000003964
Original member Current member NCBI NM_030678.3 NP_109603.2 Accepted alive Link to Nucleotide Sequence:NM_030678.3Link to Protein Sequence:NP_109603.2Re-query CCDS DB by Nucleotide ID:NM_030678Re-query CCDS DB by Protein ID:NP_109603Link to BLAST:NP_109603.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_109603.2 738 Q9Z1E4 738 100% 0 0

Chromosomal Locations for CCDS 21244.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45435053 45435170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45436532 45436713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45438102 45438293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45439479 45439664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45439905 45440049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45442423 45442540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45442916 45443036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45443528 45443634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45444632 45444691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45444779 45444857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45447898 45448011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45448253 45448379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45451563 45451658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45451751 45451914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45454822 45454902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45455041 45455367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGCCTCTCAGCCGCAGTCTCTCTGTGTCCTCGCTTCCAGGATTGGAAGACTGGGAGGATGAATTCGACC
CCGAGAACGCAGTGCTTTTCGAGGTGGCCTGGGAGGTGGCCAACAAGGTGGGTGGCATCTACACTGTGCT
GCAGACGAAGGCGAAGGTGACAGGGGATGAATGGGGTGACAACTACTATCTGGTGGGACCATACACGGAG
CAGGGTGTGAGGACGCAGGTAGAGCTCCTGGAGCCCCCAACTCCGGAACTGAAGAGGACTTTGGATTCCA
TGAACAGCAAGGGTTGTAAGGTGTATTTTGGGCGTTGGCTGATCGAGGGGGGACCCCTAGTGGTGCTCCT
GGATGTAGGAGCCTCAGCTTGGGCCCTGGAGCGCTGGAAGGGTGAGCTTTGGGACACCTGCAACATCGGG
GTACCCTGGTACGACCGCGAGGCCAATGACGCTGTCCTGTTCGGCTTCCTCACCACCTGGTTCCTGGGTG
AGTTCCTGGCCCAGAACGAAGAGAAGCCGTATGTGGTTGCCCACTTCCACGAATGGTTGGCTGGCGTTGG
TCTGTGTCTGTGCCGTGCCCGGCGCTTGCCGGTGGCAACCATCTTCACCACTCATGCCACGCTGCTGGGG
CGCTACCTGTGTGCTGGCGCTGTGGACTTCTACAACAACCTGGAGAATTTCAATGTAGACAAGGAAGCAG
GAGAGAGGCAGATCTATCACCGGTACTGCATGGAGCGTGCAGCAGCTCACTGTGCCCATGTCTTCACTAC
CGTATCCCAGATCACCGCAATCGAGGCTCAACACCTCCTTAAGAGAAAACCAGATATTGTGACCCCCAAC
GGGCTGAATGTGAAGAAGTTCTCTGCTATGCACGAATTCCAGAACCTTCATGCTCAGAGCAAAGCACGAA
TCCAGGAATTTGTGCGTGGCCATTTTTATGGGCACCTGGACTTCAACCTAGACAAGACTTTGTATTTCTT
TATCGCTGGCCGCTATGAGTTTTCCAACAAGGGAGCTGATGTGTTCCTGGAGGCATTGGCCCGGCTCAAC
TATCTGCTCAGAGTGAATGGCAGTGAGCAAACAGTTGTCGCATTCTTCATCATGCCGGCCCGGACCAATA
ATTTCAACGTGGAAACCCTGAAGGGCCAAGCCGTGCGCAAACAACTATGGGACACAGCCAATACAGTCAA
GGAGAAATTTGGGAGGAAGCTCTACGAATCCCTTTTAGTGGGGAGCCTCCCGGACATGAACAAGATGCTG
GACAAGGAGGACTTCACTATGATGAAGAGAGCCATCTTTGCCACTCAGCGGCAGTCTTTCCCACCAGTGT
GCACCCACAACATGCTGGACGACTCCTCAGACCCCATCTTGACCACCATCCGCCGAATTGGCCTTTTCAA
CAGCAGTGCCGACCGTGTGAAGGTGATTTTTCACCCAGAATTCCTTTCTTCCACAAGCCCTCTCCTCCCC
GTGGATTATGAGGAATTTGTCCGCGGCTGTCACCTTGGGGTCTTCCCCTCCTACTATGAGCCCTGGGGCT
ACACACCAGCGGAGTGCACTGTCATGGGCATCCCCAGCATCTCCACCAACCTCTCCGGCTTTGGCTGCTT
TATGGAGGAACACATCGCAGATCCCTCAGCTTACGGCATTTACATTCTGGATCGGAGGTTCCGCAGCCTG
GATGATTCATGCTCACAGCTCACCTCCTTCCTGTACAGCTTCTGCCAGCAGAGCCGGCGACAGCGCATCA
TCCAGCGGAACCGCACAGAACGGTTGTCGGACTTGCTAGATTGGAAGTACCTGGGCCGGTACTACATGTC
TGCGCGCCACATGGCTCTGGCCAAGGCCTTTCCAGACCACTTCACCTATGAACCCCATGAGGTAGATGCG
ACCCAGGGGTACCGGTACCCACGACCAGCCTCCGTCCCGCCGTCGCCCTCACTGTCTCGACACTCCAGCC
CACACCAGAGTGAGGATGAGGAAGAGCCACGGGATGGACCCCTGGGGGAAGACAGTGAGCGTTATGATGA
GGAAGAGGAGGCTGCCAAGGACCGCCGCAACATCCGGGCACCTGAGTGGCCACGCAGGGCCTCCTGTTCC
TCCTCCACAGGTGGCAGCAAGAGAAGCAACTCGGTGGACACTGGGCCCTCCAGCTCACTCAGCACACCCA
CTGAGCCCCTGAGTCCTACCAGTTCCCTGGGTGAGGAGCGCAACTAA

Translation (738 aa):
MPLSRSLSVSSLPGLEDWEDEFDPENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGDNYYLVGPYTE
QGVRTQVELLEPPTPELKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVGASAWALERWKGELWDTCNIG
VPWYDREANDAVLFGFLTTWFLGEFLAQNEEKPYVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLG
RYLCAGAVDFYNNLENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPN
GLNVKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLN
YLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKML
DKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPEFLSSTSPLLP
VDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSL
DDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPDHFTYEPHEVDA
TQGYRYPRPASVPPSPSLSRHSSPHQSEDEEEPRDGPLGEDSERYDEEEEAAKDRRNIRAPEWPRRASCS
SSTGGSKRSNSVDTGPSSSLSTPTEPLSPTSSLGEERN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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