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Report for CCDS26702.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26702.1 Public Mus musculus 13 F2rl2 23 108 98 CCDS HistoryNCBI Gene:14064Re-query CCDS DB by CCDS ID:26702.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26702.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022182.4 ENSMUSP00000022182.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022182.4Link to Ensembl Protein Viewer:ENSMUSP00000022182.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022182Re-query CCDS DB by Protein ID:ENSMUSP00000022182
Original member Current member NCBI NM_010170.4 NP_034300.3 Accepted alive Link to Nucleotide Sequence:NM_010170.4Link to Protein Sequence:NP_034300.3Re-query CCDS DB by Nucleotide ID:NM_010170Re-query CCDS DB by Protein ID:NP_034300Link to BLAST:NP_034300.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034300.3 369 O08675 369 100% 0 0

Chromosomal Locations for CCDS 26702.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 95697064 95697127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95700513 95701558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGAAAATCCTTATCTTGGTTGCAGCTGGGCTGCTGTTTCTGCCAGTCACTGTTTGCCAAAGTGGCATAA
ATGTTTCAGACAACTCAGCAAAGCCAACCTTAACTATTAAGAGTTTTAATGGGGGTCCCCAAAATACCTT
TGAAGAATTCCCACTTTCTGACATAGAGGGCTGGACAGGAGCCACCACAACTATAAAAGCGGAGTGTCCC
GAGGACAGTATTTCAACTCTCCACGTGAATAATGCTACCATAGGATACCTGAGAAGTTCCTTAAGTACCC
AAGTGATACCTGCCATCTACATCCTGCTGTTTGTGGTTGGTGTACCAGCCAACATCGTGACCCTGTGGAA
ACTCTCCTTAAGGACCAAATCCATCAGTCTGGTCATCTTTCACACCAACCTGGCCATCGCAGATCTCCTT
TTCTGTGTCACACTGCCATTTAAGATCGCCTACCATCTCAATGGCAACAACTGGGTATTTGGCGAGGTCA
CGTGCCGGATCACCACGGTTGTTTTCTACGGCAACATGTACTGCGCTATCCTGATCCTCACCTGCATGGG
CATCAACCGCTACCTGGCCACGGCTCACCCTTTCACATACCAGAAGCTGCCCAAACGCAGCTTCTCCATG
CTCATGTGTGGCATGGTGTGGGTCATGGTTTTCTTATACATGCTGCCCTTTGTCATCCTGAAGCAGGAGT
ACCACCTCGTCCACTCCGAGATCACCACCTGCCACGATGTCGTTGACGCGTGCGAGTCCCCATCATCCTT
CCGATTCTACTACTTCGTCTCCTTAGCATTCTTTGGGTTCCTCATCCCGTTTGTGATCATCATCTTCTGT
TACACGACTCTCATCCACAAACTTAAATCAAAGGATCGGATATGGCTGGGCTACATCAAGGCCGTCCTCC
TCATCCTTGTGATTTTCACAATTTGCTTTGCCCCCACCAACATCATACTCGTAATCCACCATGCCAACTA
CTACTACCACAATACCGACAGCTTGTACTTTATGTATCTTATTGCTCTGTGCCTGGGGAGCCTGAATAGC
TGCCTAGATCCATTCCTTTACTTTGTCATGTCGAAAGTTGTAGATCAGCTTAATCCTTAG

Translation (369 aa):
MKILILVAAGLLFLPVTVCQSGINVSDNSAKPTLTIKSFNGGPQNTFEEFPLSDIEGWTGATTTIKAECP
EDSISTLHVNNATIGYLRSSLSTQVIPAIYILLFVVGVPANIVTLWKLSLRTKSISLVIFHTNLAIADLL
FCVTLPFKIAYHLNGNNWVFGEVTCRITTVVFYGNMYCAILILTCMGINRYLATAHPFTYQKLPKRSFSM
LMCGMVWVMVFLYMLPFVILKQEYHLVHSEITTCHDVVDACESPSSFRFYYFVSLAFFGFLIPFVIIIFC
YTTLIHKLKSKDRIWLGYIKAVLLILVIFTICFAPTNIILVIHHANYYYHNTDSLYFMYLIALCLGSLNS
CLDPFLYFVMSKVVDQLNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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