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Report for CCDS35087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35087.1 Public Homo sapiens 9 OR13F1 24 110 108 CCDS HistoryNCBI Gene:138805Re-query CCDS DB by CCDS ID:35087.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334726.3 ENSP00000334452.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334726.3Link to Ensembl Protein Viewer:ENSP00000334452.2Re-query CCDS DB by Nucleotide ID:ENST00000334726Re-query CCDS DB by Protein ID:ENSP00000334452
Original member Current member NCBI NM_001004485.1 NP_001004485.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004485.1Link to Protein Sequence:NP_001004485.1Re-query CCDS DB by Nucleotide ID:NM_001004485Re-query CCDS DB by Protein ID:NP_001004485Link to BLAST:NP_001004485.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004485.1 319 Q8NGS4 319 100% 0 0

Chromosomal Locations for CCDS 35087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 104504263 104505222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGTTCCCGGCAAATTGGACATCTGTAAAAGTATTTTTCTTCCTGGGATTTTTTCACTACCCCAAAGTTC
AGGTCATCATATTTGCGGTGTGCTTGCTGATGTACCTGATCACCTTGCTGGGCAACATTTTTCTGATCTC
CATCACCATTCTAGATTCCCACCTGCACACCCCTATGTACCTCTTCCTCAGCAATCTCTCCTTTCTGGAC
ATCTGGTACTCCTCTTCTGCCCTCTCTCCAATGCTGGCAAACTTTGTTTCAGGGAGAAACACTATTTCAT
TCTCAGGGTGCGCCACTCAGATGTACCTCTCCCTTGCCATGGGCTCCACTGAGTGTGTGCTCCTGCCCAT
GATGGCATATGACCGGTATGTGGCCATCTGCAACCCCCTGAGATACCCTGTCATCATGAATAGGAGAACC
TGTGTGCAGATTGCAGCTGGCTCCTGGATGACAGGCTGTCTCACTGCCATGGTGGAAATGATGTCTGTGC
TGCCACTGTCTCTCTGTGGTAATAGCATCATCAATCATTTCACTTGTGAAATTCTGGCCATCTTGAAATT
GGTTTGTGTGGACACCTCCCTGGTGCAGTTAATCATGCTGGTGATCAGTGTACTTCTTCTCCCCATGCCA
ATGCTACTCATTTGTATCTCTTATGCATTTATCCTCGCCAGTATCCTGAGAATCAGCTCAGTGGAAGGTC
GAAGTAAAGCCTTTTCAACGTGCACAGCCCACCTGATGGTGGTAGTTTTGTTCTATGGGACGGCTCTCTC
CATGCACCTGAAGCCCTCCGCTGTAGATTCACAGGAAATAGACAAATTTATGGCTTTGGTGTATGCCGGA
CAAACCCCCATGTTGAATCCTATCATCTATAGTCTACGGAACAAAGAGGTGAAAGTGGCCTTGAAAAAAT
TGCTGATTAGAAATCATTTTAATACTGCCTTCATTTCCATCCTCAAATAA

Translation (319 aa):
MFPANWTSVKVFFFLGFFHYPKVQVIIFAVCLLMYLITLLGNIFLISITILDSHLHTPMYLFLSNLSFLD
IWYSSSALSPMLANFVSGRNTISFSGCATQMYLSLAMGSTECVLLPMMAYDRYVAICNPLRYPVIMNRRT
CVQIAAGSWMTGCLTAMVEMMSVLPLSLCGNSIINHFTCEILAILKLVCVDTSLVQLIMLVISVLLLPMP
MLLICISYAFILASILRISSVEGRSKAFSTCTAHLMVVVLFYGTALSMHLKPSAVDSQEIDKFMALVYAG
QTPMLNPIIYSLRNKEVKVALKKLLIRNHFNTAFISILK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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