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Report for CCDS7465.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7465.1 Public Homo sapiens 10 UBTD1 1 35.1 23 CCDS HistoryNCBI Gene:80019Re-query CCDS DB by CCDS ID:7465.1Re-query CCDS DB by GeneID:80019

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Sequence IDs included in CCDS 7465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI OTTHUMT00000049701 OTTHUMP00000020209 Accepted alive Link to Vega Transcript Viewer:OTTHUMT00000049701Link to Vega Protein Viewer:OTTHUMP00000020209Re-query CCDS DB by Nucleotide ID:OTTHUMT00000049701Re-query CCDS DB by Protein ID:OTTHUMP00000020209
Original member NCBI NM_024954.3 NP_079230.1 Accepted not alive Link to Nucleotide Sequence:NM_024954.3Link to Protein Sequence:NP_079230.1Re-query CCDS DB by Nucleotide ID:NM_024954Re-query CCDS DB by Protein ID:NP_079230Link to BLAST:NP_079230.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079230.1 227 Q9HAC8 227 100% 0 0

Chromosomal Locations for CCDS 7465.1

Assembly NCBI35 (GCF_000001405.11)

On '+' strand of Chromosome 10 (NC_000010.8)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10Link to Vega Genome Browser on chromosome 10

Chromosome Start Stop Links
10 99248951 99249020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10Link to Vega Genome Browser on chromosome 10
10 99317661 99317888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10Link to Vega Genome Browser on chromosome 10
10 99319885 99320270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10Link to Vega Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGGGCAACTGCGTGGGGAGACAGCGCCGGGAGAGGCCGGCAGCCCCGGGACACCCCCGCAAGCGAGCAG
GACGCAATGAGCCCCTGAAGAAAGAGCGGCTTAAGTGGAAGAGCGACTACCCCATGACTGACGGGCAGCT
GCGGAGCAAACGGGATGAGTTCTGGGACACAGCGCCTGCCTTCGAGGGCCGCAAGGAGATCTGGGATGCC
CTCAAGGCTGCCGCCTATGCTGCTGAAGCCAACGACCACGAGCTGGCCCAGGCCATCCTGGATGGAGCCA
GCATCACCCTGCCTCATGGCACCCTCTGTGAATGCTACGATGAGCTGGGCAATCGCTACCAGCTGCCCAT
CTACTGCCTGTCACCGCCGGTGAACCTGCTGCTGGAGCACACGGAGGAGGAGAGCCTGGAGCCCCCCGAG
CCTCCACCCAGCGTGCGCCGTGAGTTCCCGCTGAAGGTGCGCCTGTCCACGGGCAAGGACGTGAGGCTCA
GCGCCAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATC
GTGGCAGCGGTGGTTCTTCTCCGGGAAGCTGCTCACAGACCGCACACGGCTCCAGGAGACCAAGATCCAG
AAAGATTTTGTCATCCAGGTCATCATCAACCAGCCCCCACCACCCCAGGACTGA

Translation (227 aa):
MGNCVGRQRRERPAAPGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDA
LKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLEHTEEESLEPPE
PPPSVRREFPLKVRLSTGKDVRLSASLPDTVGQLKRQLHAQEGIEPSWQRWFFSGKLLTDRTRLQETKIQ
KDFVIQVIINQPPPPQD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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