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Report for CCDS7465.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7465.1 Public Homo sapiens 10 UBTD1 22 109 92 CCDS HistoryNCBI Gene:80019Re-query CCDS DB by CCDS ID:7465.1Re-query CCDS DB by GeneID:80019See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Sequence IDs included in CCDS 7465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370664.3 ENSP00000359698.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370664.3Link to Ensembl Protein Viewer:ENSP00000359698.3Re-query CCDS DB by Nucleotide ID:ENST00000370664Re-query CCDS DB by Protein ID:ENSP00000359698
Original member NCBI NM_024954.4 NP_079230.1 Updated not alive Link to Nucleotide Sequence:NM_024954.4Link to Protein Sequence:NP_079230.1Re-query CCDS DB by Nucleotide ID:NM_024954Re-query CCDS DB by Protein ID:NP_079230
Current member NCBI NM_024954.5 NP_079230.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024954.5Link to Protein Sequence:NP_079230.1Re-query CCDS DB by Nucleotide ID:NM_024954Re-query CCDS DB by Protein ID:NP_079230Link to BLAST:NP_079230.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079230.1 227 Q9HAC8 227 100% 0 0

Chromosomal Locations for CCDS 7465.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97499204 97499273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97567914 97568141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97570138 97570523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGGGCAACTGCGTGGGGAGACAGCGCCGGGAGAGGCCGGCAGCCCCGGGACACCCCCGCAAGCGAGCAG
GACGCAATGAGCCCCTGAAGAAAGAGCGGCTTAAGTGGAAGAGCGACTACCCCATGACTGACGGGCAGCT
GCGGAGCAAACGGGATGAGTTCTGGGACACAGCGCCTGCCTTCGAGGGCCGCAAGGAGATCTGGGATGCC
CTCAAGGCTGCCGCCTATGCTGCTGAAGCCAACGACCACGAGCTGGCCCAGGCCATCCTGGATGGAGCCA
GCATCACCCTGCCTCATGGCACCCTCTGTGAATGCTACGATGAGCTGGGCAATCGCTACCAGCTGCCCAT
CTACTGCCTGTCACCGCCGGTGAACCTGCTGCTGGAGCACACGGAGGAGGAGAGCCTGGAGCCCCCCGAG
CCTCCACCCAGCGTGCGCCGTGAGTTCCCGCTGAAGGTGCGCCTGTCCACGGGCAAGGACGTGAGGCTCA
GCGCCAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATC
GTGGCAGCGGTGGTTCTTCTCCGGGAAGCTGCTCACAGACCGCACACGGCTCCAGGAGACCAAGATCCAG
AAAGATTTTGTCATCCAGGTCATCATCAACCAGCCCCCACCACCCCAGGACTGA

Translation (227 aa):
MGNCVGRQRRERPAAPGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDA
LKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLEHTEEESLEPPE
PPPSVRREFPLKVRLSTGKDVRLSASLPDTVGQLKRQLHAQEGIEPSWQRWFFSGKLLTDRTRLQETKIQ
KDFVIQVIINQPPPPQD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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