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Report for CCDS72334.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72334.1 Public Mus musculus X Gripap1 19 105 81 CCDS HistoryNCBI Gene:54645Re-query CCDS DB by CCDS ID:72334.1Re-query CCDS DB by GeneID:54645See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Sequence IDs included in CCDS 72334.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member EBI ENSMUST00000115675 ENSMUSP00000111339 Accepted not alive Link to Ensembl Transcript Viewer:ENSMUST00000115675Link to Ensembl Protein Viewer:ENSMUSP00000111339Re-query CCDS DB by Nucleotide ID:ENSMUST00000115675Re-query CCDS DB by Protein ID:ENSMUSP00000111339
Original member Current member EBI OTTMUST00000043335 OTTMUSP00000019477 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000043335Link to Vega Protein Viewer:OTTMUSP00000019477Re-query CCDS DB by Nucleotide ID:OTTMUST00000043335Re-query CCDS DB by Protein ID:OTTMUSP00000019477
Original member NCBI NM_001290455.1 NP_001277384.1 Accepted not alive Link to Nucleotide Sequence:NM_001290455.1Link to Protein Sequence:NP_001277384.1Re-query CCDS DB by Nucleotide ID:NM_001290455Re-query CCDS DB by Protein ID:NP_001277384Link to BLAST:NP_001277384.1

Chromosomal Locations for CCDS 72334.1

Assembly GRCm38.p3 (GCF_000001635.23)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 7790027 7790068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7792070 7792136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7792276 7792337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7794260 7794286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7794992 7795099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7799290 7799428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7800157 7800341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7800536 7800583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7801177 7801208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7801304 7801351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7801490 7801589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7803323 7803400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7803594 7803686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7804360 7804494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7809893 7809988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7810253 7810465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7810608 7810721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7812282 7812359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7812465 7812560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7812682 7812738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7812832 7812931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7814568 7814698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7818027 7818149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7818296 7818389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7819167 7819321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X
X 7820002 7820094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XLink to Vega Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2514 nt):
ATGGCGCAAGCTCTGTCTGAAGAGGAGTTTCAACGGATGCAGACTCAGCTCCTGGAGCTCCGGACAAATA
ACTACCAGCTTTCGGATGAACTTCGGAAGAATGGTGTTGAACTTTCCAGTCTTCGACAGAAGGTCGCCTA
CCTGGATAAGGAGTTCAGTAAAGCTCAAAAGGCACTAAGCAAGAGCAAGAAAGCTCAGGAAGTGGAGGTA
CTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACA
GTACACTTATGGCCGAGTTCAGCAAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACT
CAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTGGACGGGGAGCTGCTGAGGCTGCAGGCAGAGAAC
ACAGCCTTGCAGAAGAACATGGCAGCACTGCAGGAACGCTATGGGAAAGAGGCTGTGAGGCCCTCTGCTG
TTGGTGAGGGCCAAGGGGATCCCCCAGGAGACGTACTCCCCACTCCCCTGGCTCCCATGCCATTGGCAGA
AGTGGAGCTGAAATGGGAAATGGAGCGAGAAGAAAAAAAATTGCTCTGGGAGCAGCTACAAGGCTTAGAG
AGCTCAAAGCAAGCTGAAACCTCCAGACTACAGGAGGAACTTGCTAAGCTCTCTGAGAAATTGAAAAAGA
AACAAGAAAGTTTTTGCCGTCTGCAGACAGAGAAGGAAACACTGTTTAATGACAGCAGAAACAAAATTGA
AGAATTGCAACAGCGGAAGGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGAA
CTTGAGGCTGCCAATCAGAGTTTGGCAGAGCTAAGAGATCAGCGGCAGGGGGAGCGTCTGGAGCATGCAG
CAGCGTTGCGGGCCCTACAAGATCAGGTGTCCAGCCAGAGTGCAGATGCGCAGGAACAAGTGGAAGGGCT
CTTGGCTGAGAACAGTGCCTTGAGGACTAGCTTGGCTGCTCTGGAGCAGATCCAGACAGCAAAGACACAA
GAACTGAATATGCTTCGGGAACAGACCAGTGAATTGGCATCTGAGTTACAGCATCGTCAAGCTGAATATG
AAGAGCTTATGGGACAGAAAGATGACCTCAACTCGCAGCTCCAGGAGTCGTTAAGGGCCAATAGCCGGCT
GCTGGAACAACTTCAAGAAATAGGGCAGGAGAAGGAGCAGCTAACCCAGGATCTCCAGGAAGCTCGGAAG
AGTGCCGAGAAAAGGAAGGTCATGCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACA
AAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAAGGAGCTGCTGGGCGTGCGAGCCCGATACGAGCG
TGAGCTTCGAGAACTGCACGAGGACAAGAAGCGGCAGGAGGAGGAGCTCCGGGGGCAGATTCGTGAGGAG
AAGGCTCGAACAAGGGAATTAGAAAATCTTCAGCACACAGTGGAAGAACTCCAGGCTCAGGTACACTCCA
TGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCTGAGGAATCTTTGCAGCAGCAGCAACA
GGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGAGCACGCCGCTGAGCTGAAGGGCAAGGATGAAGAG
CTTCAGAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGAGCGAGATGGCCACGTGAAGACCATCAGCA
ACCTGAAGCAGGAGGTAAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAAGAAAGGCAGCGCTGTGCT
CAAAGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGAG
ATCCTTACCAACAGCAAGAGCCGCACAGGCCTCGAGGAGCTGGTTCTGTCTGAGATGAACTCACCAAGCA
GGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCTTCAGCTACCGGGAGATCTTGAAGGAGAAGGAGAG
TTCAGCCATCCCAGCCAGGTCTCTATCCAGCAGTCCTCAGGCCCAGCCCCCTCGGCCAGCAGAGCTGTCA
GATGAGGAAGTGGCTGAGCTGTTTCAGAGGCTGGCCGAGACTCAGCAGGAAAAATGGATGCTAGAGGAGA
AGGTGAAACACCTGGAGGTGAGCAGCGCCTCTATGGCGGAAGATCTCTGCCGGAAAAGCGCCATCATTGA
GACCTACGTCATGGACAGCCGGATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGGGCTGGGC
AGTGTCCTGAGAGACCTAGTGAAGCCAGGCGATGAGAACCTTCGAGAAATGAACAAGAAGCTGCAGAACA
TGTTGGAGGAGCAACTCACCAAGAACATGCACTTGCACAAGGACATGGAAGTTCTATCCCAGGAAATTGT
GCGGCTCAGCAAGGAATGTGTGGGGTCCCCTGACCCAGACCTAGAACCTGGAGAAGCCAACTAA

Translation (837 aa):
MAQALSEEEFQRMQTQLLELRTNNYQLSDELRKNGVELSSLRQKVAYLDKEFSKAQKALSKSKKAQEVEV
LLSENEMLQAKLHSQEEDFRLQNSTLMAEFSKLCSQLEQLELENRQLKEGVPGAAGAHVDGELLRLQAEN
TALQKNMAALQERYGKEAVRPSAVGEGQGDPPGDVLPTPLAPMPLAEVELKWEMEREEKKLLWEQLQGLE
SSKQAETSRLQEELAKLSEKLKKKQESFCRLQTEKETLFNDSRNKIEELQQRKEADLKAQLARTQKLQQE
LEAANQSLAELRDQRQGERLEHAAALRALQDQVSSQSADAQEQVEGLLAENSALRTSLAALEQIQTAKTQ
ELNMLREQTSELASELQHRQAEYEELMGQKDDLNSQLQESLRANSRLLEQLQEIGQEKEQLTQDLQEARK
SAEKRKVMLDELAMETLQEKSQHKEELGAVRLRHEKELLGVRARYERELRELHEDKKRQEEELRGQIREE
KARTRELENLQHTVEELQAQVHSMDGAKGWFERRLKEAEESLQQQQQEQEETLKLCREEHAAELKGKDEE
LQNVREQLQQAQEERDGHVKTISNLKQEVKDTVDGQRILEKKGSAVLKDLKRQLHLERKRADKLQERLQE
ILTNSKSRTGLEELVLSEMNSPSRTQTGDSSSVSSFSYREILKEKESSAIPARSLSSSPQAQPPRPAELS
DEEVAELFQRLAETQQEKWMLEEKVKHLEVSSASMAEDLCRKSAIIETYVMDSRIDVSVAAGHTDRSGLG
SVLRDLVKPGDENLREMNKKLQNMLEEQLTKNMHLHKDMEVLSQEIVRLSKECVGSPDPDLEPGEAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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