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Report for CCDS7284.1 (previous version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
7284.1 |
Public |
Homo sapiens |
10 |
KIFBP |
17 |
106 |
76 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:26128](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:7284.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:26128](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Sequence IDs included in CCDS 7284.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
|
EBI |
ENST00000361983 |
ENSP00000354848 |
|
Accepted |
not alive |
![Link to Ensembl Transcript Viewer:ENST00000361983](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000354848](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000361983](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000354848](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
OTTHUMT00000048370 |
OTTHUMP00000019712 |
|
Accepted |
alive |
![Link to Vega Transcript Viewer:OTTHUMT00000048370](IMG/ccds-Nucleotide.jpg) ![Link to Vega Protein Viewer:OTTHUMP00000019712](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:OTTHUMT00000048370](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:OTTHUMP00000019712](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_015634.3 |
NP_056449.1 |
|
Accepted |
not alive |
![Link to Nucleotide Sequence:NM_015634.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056449.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015634](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056449](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056449.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_056449.1 |
621 |
Q96EK5 |
621 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 7284.1
Assembly GRCh38 (GCF_000001405.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1866 nt): ATGGCGAACGTTCCGTGGGCAGAGGTCTGCGAGAAATTCCAGGCGGCGCTCGCTCTGTCGCGGGTGGAAC TGCATAAAAATCCGGAGAAGGAACCATACAAGTCCAAATACAGCGCCCGGGCGCTACTGGAAGAGGTCAA GGCGCTGCTCGGCCCTGCGCCTGAGGACGAGGATGAGCGGCCTGAGGCCGAGGACGGCCCGGGTGCCGGT GACCACGCCCTGGGGCTGCCGGCTGAGGTGGTGGAGCCCGAGGGGCCCGTCGCCCAGCGAGCGGTGAGGC TGGCAGTCATCGAGTTCCACCTCGGGGTGAACCACATCGACACGGAGGAGCTGTCGGCGGGGGAGGAGCA CCTGGTGAAATGCCTGCGGCTGCTGCGCAGGTACCGGCTCTCGCACGACTGCATCTCTCTCTGCATCCAG GCGCAGAATAACCTGGGTATCTTGTGGTCTGAAAGAGAAGAAATTGAAACTGCACAGGCTTACCTAGAGT CATCAGAAGCACTATATAATCAGTATATGAAAGAGGTTGGGAGTCCTCCTCTTGATCCTACTGAGCGTTT TCTTCCTGAAGAAGAGAAACTTACTGAACAAGAGAGATCAAAAAGATTTGAAAAGGTTTATACTCATAAC CTATATTACCTAGCTCAAGTCTACCAGCATCTGGAAATGTTTGAGAAGGCTGCTCACTATTGCCATAGTA CACTAAAACGCCAGCTTGAGCACAATGCCTACCATCCTATAGAGTGGGCTATCAATGCTGCTACCTTGTC ACAGTTTTACATCAATAAGCTATGCTTTATGGAGGCCAGGCACTGTTTATCAGCTGCTAATGTCATTTTT GGTCAAACTGGAAAGATCTCAGCCACAGAAGACACTCCTGAAGCTGAAGGAGAAGTGCCAGAGCTTTATC ATCAAAGAAAGGGGGAAATAGCAAGGTGCTGGATCAAATACTGTTTGACTCTCATGCAGAATGCCCAACT CTCCATGCAGGACAACATAGGAGAGCTTGATCTTGATAAACAGTCTGAACTTAGAGCTTTAAGGAAAAAA GAACTAGATGAGGAGGAAAGCATTCGGAAAAAAGCTGTGCAGTTTGGAACCGGTGAACTGTGTGATGCCA TCTCTGCAGTAGAAGAGAAAGTGAGCTACTTGAGACCTTTAGATTTTGAAGAAGCCAGAGAACTTTTCTT ATTGGGTCAGCACTATGTCTTTGAGGCAAAAGAGTTCTTTCAGATTGATGGTTATGTCACTGACCATATT GAAGTTGTCCAAGACCACAGTGCTCTGTTTAAGGTGCTTGCATTCTTTGAAACTGACATGGAGAGACGGT GCAAGATGCATAAACGCAGAATAGCCATGCTAGAGCCCCTAACTGTAGACCTGAATCCACAGTATTATCT GTTGGTCAACAGACAGATCCAGTTTGAAATTGCACATGCTTACTATGATATGATGGATTTGAAGGTTGCC ATTGCTGACAGGCTAAGGGATCCTGATTCACACATTGTAAAAAAAATAAATAATCTTAATAAGTCAGCAC TGAAGTACTACCAGCTCTTCTTAGACTCCCTGAGAGACCCAAATAAAGTATTCCCTGAGCATATAGGGGA AGATGTTCTTCGCCCTGCCATGTTAGCTAAGTTTCGAGTTGCCCGTCTCTATGGCAAAATCATTACTGCA GATCCCAAGAAAGAGCTGGAAAATTTGGCAACATCATTGGAACATTACAAATTTATTGTTGATTACTGTG AAAAGCATCCTGAGGCCGCCCAGGAAATAGAAGTTGAGCTAGAACTTAGTAAAGAGATGGTTAGTCTTCT CCCAACAAAAATGGAGAGATTCAGAACCAAGATGGCCCTGACTTAA
Translation (621 aa): MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDERPEAEDGPGAG DHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQ AQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPPLDPTERFLPEEEKLTEQERSKRFEKVYTHN LYYLAQVYQHLEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF GQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKK ELDEEESIRKKAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHAYYDMMDLKVA IADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVLRPAMLAKFRVARLYGKIITA DPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELSKEMVSLLPTKMERFRTKMALT
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