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Report for CCDS23738.1 (previous version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23738.1 Public Mus musculus 10 Taar5 2 36.1 39 CCDS HistoryNCBI Gene:215854Re-query CCDS DB by CCDS ID:23738.1Re-query CCDS DB by GeneID:215854

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 23738.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member EBI ENSMUST00000092659 ENSMUSP00000090329 Accepted not alive Link to Ensembl Transcript Viewer:ENSMUST00000092659Link to Ensembl Protein Viewer:ENSMUSP00000090329Re-query CCDS DB by Nucleotide ID:ENSMUST00000092659Re-query CCDS DB by Protein ID:ENSMUSP00000090329
Original member Current member NCBI NM_001009574.1 NP_001009574.1 Accepted alive Link to Nucleotide Sequence:NM_001009574.1Link to Protein Sequence:NP_001009574.1Re-query CCDS DB by Nucleotide ID:NM_001009574Re-query CCDS DB by Protein ID:NP_001009574Link to BLAST:NP_001009574.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009574.1 337 Q5QD14 337 100% 0 0

Chromosomal Locations for CCDS 23738.1

Assembly MGSCv36 (GCF_000001635.15)

On '+' strand of Chromosome 10 (NC_000076.4)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

Chromosome Start Stop Links
10 23660122 23661135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGAGAGCTGTCCTCCTCCCGGGCTCTGGAGAGCAGCCTACAGCGTTCTGCTACCAGGTGAATGGGTCTT
GCCCCAGGACAGTCCACCCGCTGGCCATCCAGGTCGTCATCTATCTGGCCTGCGCAGTGGGTGTGCTGAT
CACAGTCCTGGGGAATTTGTTTGTGGTGTTTGCAGTGTCCTACTTTAAAGTGCTCCACACGCCCACCAAC
TTCCTGCTGCTCTCCCTGGCCCTGGCAGACATGTTGCTAGGTCTGCTGGTGCTGCCCCTGAGCACAGTCC
GCTCTGTGGAGAGCTGCTGGTTCTTTGGAGACTTCCTGTGCCGTCTGCATACCTATCTGGACACGCTGTT
CTGTCTCACCTCCATCTTCCATCTCTGTTTTATTTCCATTGACCGTCATTGTGCCATCTGTGACCCCCTG
CTCTATCCCTCCAAGTTCACAGTCAGGACAGCCCTCCGCTACATCGTGGCAGGGTGGGGGATACCAGCAG
CCTACACTGCCTTCTTCCTCTACACAGATGTGGTAGAGAGAGCACTCAGCCAGTGGCTAGAAGAGATGCC
TTGTGTGGGCAGCTGCCAGCTGCTGTTCAATAAGTTCTGGGGTTGGTTAAACTTCCCTGCATTTTTTGTT
CCCTGCCTAATCATGATCAGCTTGTACCTGAAGATCTTTGTGGTCGCCACCAGGCAGGCTCAGCAGATCA
GAACTCTGAGCCAAAGCTTGGCTGGGGCTGTCAAGCGGGAAAGAAAAGCTGCCAAGACGCTGGGCATTGC
TGTGGGCATCTACCTTGTGTGTTGGCTTCCCTTCACTGTTGACACACTAGTGGACAGCCTTCTTAACTTC
ATCACCCCACCCCTGGTCTTTGACATCTTTATCTGGTTTGCTTATTTCAATTCAGCCTGTAATCCCATCA
TCTACGTCTTCTCCTACCGGTGGTTTAGGAAGGCACTGAAACTGCTCCTGAGCCGGGAGATCTTCTCACC
AAGGACACCGACTGTTGATTTATACCATGACTGA

Translation (337 aa):
MRAVLLPGSGEQPTAFCYQVNGSCPRTVHPLAIQVVIYLACAVGVLITVLGNLFVVFAVSYFKVLHTPTN
FLLLSLALADMLLGLLVLPLSTVRSVESCWFFGDFLCRLHTYLDTLFCLTSIFHLCFISIDRHCAICDPL
LYPSKFTVRTALRYIVAGWGIPAAYTAFFLYTDVVERALSQWLEEMPCVGSCQLLFNKFWGWLNFPAFFV
PCLIMISLYLKIFVVATRQAQQIRTLSQSLAGAVKRERKAAKTLGIAVGIYLVCWLPFTVDTLVDSLLNF
ITPPLVFDIFIWFAYFNSACNPIIYVFSYRWFRKALKLLLSREIFSPRTPTVDLYHD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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