Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566073: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319752' containing sample 'VET1068S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 7.8M spots, 1.6G bases, 707Mb downloads

UUID: 6b34e597-8d3b-479e-b9b0-d8c161a6163e

Design: Illumina sequencing of Staphylococcus aureus VET1068S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228870 • SRP042689 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1068S

SAMN02404360 • SRS626329 • All experiments • All runs

Organism: Staphylococcus aureus VET1068S

Library:

Name: Pond-319752

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470806.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDGV

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55276

research_project: RP-513

root_sample_id: SM-4Q54V

sample_id: SM-5CDGV

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 7.8M spots, 1.6G bases, 707Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326956	3,959,396	799.8M	356.7Mb	2014-06-03
SRR1340400	3,874,989	782.7M	350.2Mb	2014-06-05

ID:: 808890

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity