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SRX248091: Illumina whole genome shotgun sequencing of genomic DNA library 'Pond-61107' containing sample B123
1 ILLUMINA (Illumina HiSeq 2000) run: 18,007 spots, 1.8M bases, 2.8Mb downloads

UUID: d4cd84a8-f443-476a-965f-b0fc47e3f748
Design: Illumina sequencing of Pneumocystis murina B123 via random selection
Submitted by: Broad Institute (BI)
Study: Pneumocystis murina B123 genome sequencing
show Abstracthide Abstract
A pneuma yeast-like fungus that causes pulmonary infections in mice. The growth in lungs appears obligate, as the fungus can not currently be grown in culture. Other species of <i>Pneumocystis</i> infect different hosts, such as <i>P. jirovecii</i>, which infects humans. <i>Pneumocystis</i> species are found in the Taphrinomycotina subdivision of Ascomycota, along with <i>Schizosaccharomyces pombe</i>.
Sample: Generic sample from Pneumocystis murina B123
SAMN00102820 • SRS000812 • All experiments • All runs
Library:
Name: Pond-61107
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
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Experiment attributes: (show all 5 attributes...) (hide...)
gssr_id: 67177.1
lsid: BROAD:SEQUENCING_SAMPLE:67177.1
material_type: Genomic DNA
project: G11228
work_request: 24846
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2011-03-30 23:56:09.0GAPipelineRTA1.10.36Sequencer Application 1.3.8
Runs: 1 run, 18,007 spots, 1.8M bases, 2.8Mb
Run# of Spots# of BasesSizePublished
SRR77045818,0071.8M2.8Mb2013-03-12

ID:
342367

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