Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

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SRX392993: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-201596' containing sample 'M34D1' from individual 'MyD88 TB Infected Mouse 4 Day 1'
1 ILLUMINA (Illumina MiSeq) run: 93,145 spots, 32.6M bases, 21.9Mb downloads

UUID: f3450e17-d212-4af6-b0a7-1d82fbcbc9eb

Design: Illumina sequencing of Mycobacterium tuberculosis M34D1 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis M34D1

SAMN02391099 • SRS515950 • All experiments • All runs

Organism: Mycobacterium tuberculosis M34D1

Library:

Name: Solexa-201596

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 440843.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:55V9X

material_type: DNA:DNA Somatic

product_order: PDO-2385

product_part_number: P-MCV-0002

project: G51618

research_project: RP-114

root_sample_id: SM-4PMCG

sample_id: SM-55V9X

work_request: 39230

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-07 19:10:56.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 93,145 spots, 32.6M bases, 21.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1051105	93,145	32.6M	21.9Mb	2013-12-16

ID:: 567041

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