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SRX317049: RNA samples extracted from different organs of the Cavendish cultivar were pooled for deep sequencing using the Illumina sequencing technology.
1 ILLUMINA (Illumina HiSeq 2000) run: 13.3M spots, 2.4G bases, 1.4Gb downloads

Submitted by: CHINESE ACADEMY OF TROPICAL AGRICULTURE SCIENCES
Study: Musa acuminata strain:Cavendish Transcriptome or Gene expression
show Abstracthide Abstract
Banana (Musa) is one of the most important crops grown in tropical and sub-tropical areas. Cavendish, the most widely grown banana cultivar, is a triploid derived from an intra-species cross. Cavendish is relatively resistant to Race 1 of Fusarium oxysporum f. sp. Cubense (Foc1) which caused wide spread Panama disease during 1960s but is susceptible to Race 4 of Foc (Foc4) which has been causing epidemics in large areas of banana fields in Asia and Australia in the last decade and is threatening world banana production. The genome of the diploid species Musa acuminata (AA) which is the ancestor of a majority of cultivated banana has recently been sequenced. Availability of banana transcriptomes will be highly useful for improving banana genome annotation and assembly and for banana biological research.
Sample: General Sample for Musa acuminata
SAMN02222206 • SRS454301 • All experiments • All runs
Organism: Musa acuminata
Library:
Name: Musa RNA
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward91  reverse

Pipeline: show...hide...
ProgramVersion
Illumina GApipeline1.6
Runs: 1 run, 13.3M spots, 2.4G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR92432413,333,3342.4G1.4Gb2015-07-22

ID:
442374

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