U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX299163: Whole Genome Sequencing of Gammaproteobacteria bacterium SCGC AAA003-E02
1 ILLUMINA (Illumina HiSeq 2000) run: 12.4M spots, 3.7G bases, 2.3Gb downloads

Submitted by: DOE JOINT GENOME INSTITUTE (JGI)
Study: Gammaproteobacteria bacterium SCGC AAA003-E02
show Abstracthide Abstract
Dark ocean microbial single-cell genomics. This is a reference genome for studying planktonic microorganisms from the ocean below 200 m. Genomes from predominant dark-ocean clades will improve interpretation of metagenomic, metatranscriptomic and metaproteomic data to better understand metabolic features and ecological roles of the microbial groups. We focus on microbes without representation in laboratory cultures or genome sequencing projects, as well as chemoautotrophic groups, which likely have a major impact on the global carbon cycle.
Sample: Gammaproteobacteria bacterium SCGC AAA003-E02
SAMN02194886 • SRS438995 • All experiments • All runs
Library:
Name: NPCB
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward151  forward

Runs: 1 run, 12.4M spots, 3.7G bases, 2.3Gb
Run# of Spots# of BasesSizePublished
SRR89247912,405,6283.7G2.3Gb2013-06-11

ID:
421454

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...