Targeted sequencing of Vicia lomensis - SRA

SRX22454074: Targeted sequencing of Vicia lomensis
1 ILLUMINA (Illumina HiSeq 3000) run: 432,342 spots, 129.7M bases, 51Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 13

PRJNA1022141 • SRP471016 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Vicia lomensis

SAMN37590446 • SRS19468078 • All experiments • All runs

Organism: Vicia lomensis

Library:

Name: bbe45c75-f076-4192-a642-9b6c156b00e6

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 432,342 spots, 129.7M bases, 51Mb

Run	# of Spots	# of Bases	Size	Published
SRR26755329	432,342	129.7M	51Mb	2023-11-09

ID:: 30439744

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity