Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473394: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322750' containing sample 'M2479'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 632.6M bases, 241Mb downloads

UUID: 73b40688-7713-4a12-8150-3f5085e209b0

Design: Illumina sequencing of Mycobacterium tuberculosis M2479 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235813 • SRP038420 • All experiments • All runs

Sample:

SAMN02599147 • SRS559717 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2479

Library:

Name: Pond-322750

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485254.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5VX

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57904

research_project: RP-114

root_sample_id: SM-4PA3K

sample_id: SM-5G5VX

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 632.6M bases, 241Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172856	1,575,685	318.3M	121Mb	2014-02-20
SRR1172978	1,555,936	314.3M	120Mb	2014-02-20

ID:: 653884

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