rplB and ospC genes high throughput sequencing - Borrelia burgdorferi... - SRA

SRX373997: rplB and ospC genes high throughput sequencing - Borrelia burgdorferi species complex that infect rodent S06Ts001
1 LS454 (454 GS FLX) run: 22 spots, 15,457 bases, 46,281b downloads

Design: "Purified rplB and ospC PCR products were then mixed with each other and sent to GATC-Biotech (Konstanz, Germany) for sequencing on 1/16th of a GS FLX sequencing plate."

Submitted by: INRA

Study: Borrelia burgdorferi species complex that infect rodents Targeted Locus (Loci)

PRJNA225526 • SRP032755 • All experiments • All runs

show Abstracthide Abstract

3 species of rodent were captured and tested for Borrelia (the lyme desease pathogen). For randomly chosen positive rodents, 2 Borrelia markers were amplified and sequenced using 454 high throughput sequencing.

Sample: MIMARKS Survey related sample from Borrelia burgdorferi species complex

SAMN02387623 • SRS499352 • All experiments • All runs

Organism: Borreliella sp. S06Ts001

Library:

Instrument: 454 GS FLX

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 1 run, 22 spots, 15,457 bases, 46,281b

Run	# of Spots	# of Bases	Size	Published
SRR1025787	22	15,457	46,281b	2014-02-28

ID:: 535800

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