Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX375519: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281297' containing sample 'Staphylococcus aureus M1113'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 967.6M bases, 430.6Mb downloads

UUID: 0f1bce99-0670-42d1-907f-1ef30e78326c

Design: Illumina sequencing of Staphylococcus aureus M1113 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA219980 • SRP032842 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1113

SAMN02360787 • SRS500755 • All experiments • All runs

Organism: Staphylococcus aureus M1113

Library:

Name: Pond-281297

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407704.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBGU

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48484

research_project: RP-433

root_sample_id: SM-4CVTD

sample_id: SM-4WBGU

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 967.6M bases, 430.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028027	2,353,460	475.4M	210.4Mb	2013-11-11
SRR1043818	2,436,735	492.2M	220.2Mb	2013-12-05

ID:: 537415

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