Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX368103: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279943' containing sample 'Staphylococcus aureus M1391'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.5M spots, 905.9M bases, 399.8Mb downloads

UUID: e84cb31e-fd24-41e1-9a2b-80452d2d36b3

Design: Illumina sequencing of Staphylococcus aureus M1391 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218389 • SRP032093 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1391

SAMN02350569 • SRS494145 • All experiments • All runs

Organism: Staphylococcus aureus M1391

Library:

Name: Pond-279943

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402395.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJO9

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47853

research_project: RP-433

root_sample_id: SM-4CW8I

sample_id: SM-4VJO9

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.5M spots, 905.9M bases, 399.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017342	2,243,356	453.2M	200.2Mb	2013-10-25
SRR1017343	2,241,471	452.8M	199.5Mb	2013-10-25

ID:: 526734

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