U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX000201: 454 sequencing of marine metagenome fragment library
2 LS454 (454 GS 20) runs: 709,292 spots, 76.1M bases, 190.2Mb downloads

Design: none provided
Submitted by: San Diego State University (SDSU)
Study: Marine phages from the Arctic Ocean
show Abstracthide Abstract
A combined set of 56 samples was isolated by the Suttle Laboratory from 16 different sites in the Arctic Ocean between September 1, 2002 and October 31, 2002. The phage fraction was purified and sequenced using pyrophosphate sequencing (454 Life Sciences). This is part of a global ocean survey of phage and virus sequences. 454 sequence data is available from the Short Read Archive (SRA): <a href="ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000410 ">SRA000410</a>. Metagenomics SEED ID: 4440306.3 Nature paper ID: 34 The WGS project can be found using the Project data link.
Sample: Generic sample from marine metagenome
SAMN00000124 • SRS000357 • All experiments • All runs
Library:
Name: ArcticVir2002
Instrument: 454 GS 20
Strategy: OTHER
Source: OTHER
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
         forward

Runs: 2 runs, 709,292 spots, 76.1M bases, 190.2Mb
Run# of Spots# of BasesSizePublished
SRR001036376,90940.4M100.9Mb2008-04-18
SRR001037332,38335.7M89.2Mb2008-04-18

ID:
202

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...