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    IKZF1 IKAROS family zinc finger 1 [ Tursiops truncatus (common bottlenose dolphin) ]

    Gene ID: 101324374, updated on 8-Mar-2024

    Summary

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    Gene symbol
    IKZF1
    Gene description
    IKAROS family zinc finger 1
    See related
    EnsemblRapid:ENSTTRG00000007440
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tursiops truncatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
    Orthologs
    human mouse all
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    Genomic context

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    See IKZF1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current mTurTru1.mat.Y (GCF_011762595.1) 9 NC_047042.1 (2352700..2444316)
    101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842243.1 (6814448..6902514, complement)

    Chromosome 9 - NC_047042.1Genomic Context describing neighboring genes Neighboring gene zona pellucida binding protein Neighboring gene sperm microtubule inner protein 7 Neighboring gene uncharacterized LOC117313554 Neighboring gene fidgetin like 1 Neighboring gene dopa decarboxylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding protein Ikaros

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTurTru1.mat.Y Primary Assembly

    Genomic

    1. NC_047042.1 Reference mTurTru1.mat.Y Primary Assembly

      Range
      2352700..2444316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019939598.2 → XP_019795157.2  DNA-binding protein Ikaros isoform X10

      UniProtKB/TrEMBL
      A0A2U4BPL2
      Conserved Domains (2) summary
      COG5048
      Location:1 → 112
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_019939564.2 → XP_019795123.2  DNA-binding protein Ikaros isoform X5

      UniProtKB/TrEMBL
      A0A2U4BPH5
      Conserved Domains (2) summary
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    3. XM_019939592.2 → XP_019795151.2  DNA-binding protein Ikaros isoform X9

      UniProtKB/TrEMBL
      A0A2U4BPS3
      Conserved Domains (2) summary
      COG5048
      Location:1 → 112
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_033862767.1 → XP_033718658.1  DNA-binding protein Ikaros isoform X11

      UniProtKB/TrEMBL
      A0A6J3RVV5
      Conserved Domains (3) summary
      COG5048
      Location:164 → 238
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    5. XM_033862765.1 → XP_033718656.1  DNA-binding protein Ikaros isoform X2

      UniProtKB/TrEMBL
      A0A6J3RVR3
      Conserved Domains (3) summary
      COG5048
      Location:164 → 238
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    6. XM_033862764.1 → XP_033718655.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      A0A2U4BPH7
      Conserved Domains (3) summary
      COG5048
      Location:164 → 238
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    7. XM_019939585.2 → XP_019795144.2  DNA-binding protein Ikaros isoform X8

      UniProtKB/TrEMBL
      A0A2U4BPX1
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_033862766.1 → XP_033718657.1  DNA-binding protein Ikaros isoform X4

      UniProtKB/TrEMBL
      A0A6J3RVS7
      Related
      ENSTTRP00000030103.1, ENSTTRT00000045327.1
      Conserved Domains (3) summary
      COG5048
      Location:134 → 208
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:109 → 129
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:122 → 146
      zf-H2C2_2; Zinc-finger double domain

    9. XM_019939573.2 → XP_019795132.2  DNA-binding protein Ikaros isoform X6

      UniProtKB/TrEMBL
      A0A2U4BPI3
      Related
      ENSTTRP00000029843.1, ENSTTRT00000027650.1
      Conserved Domains (2) summary
      sd00017
      Location:119 → 139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132 → 156
      zf-H2C2_2; Zinc-finger double domain

    10. XM_019939551.2 → XP_019795110.2  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      A0A2U4BPH7
      Conserved Domains (3) summary
      COG5048
      Location:164 → 238
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    11. XM_019939579.2 → XP_019795138.2  DNA-binding protein Ikaros isoform X7

      UniProtKB/TrEMBL
      A0A2U4BPI9
      Related
      ENSTTRP00000019421.1, ENSTTRT00000044391.1
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    12. XM_019939558.2 → XP_019795117.2  DNA-binding protein Ikaros isoform X3

      UniProtKB/TrEMBL
      A0A2U4BPG8
      Related
      ENSTTRP00000029403.1, ENSTTRT00000040056.1
      Conserved Domains (3) summary
      COG5048
      Location:144 → 218
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:119 → 139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132 → 156
      zf-H2C2_2; Zinc-finger double domain

    13. XM_033862763.1 → XP_033718654.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      A0A2U4BPH7
      Conserved Domains (3) summary
      COG5048
      Location:164 → 238
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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