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    MLXIP MLX interacting protein [ Tursiops truncatus (common bottlenose dolphin) ]

    Gene ID: 101333249, updated on 8-Mar-2024

    Summary

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    Gene symbol
    MLXIP
    Gene description
    MLX interacting protein
    See related
    EnsemblRapid:ENSTTRG00000003024
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tursiops truncatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
    Orthologs
    human mouse all
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    Genomic context

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    See MLXIP in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current mTurTru1.mat.Y (GCF_011762595.1) 13 NC_047046.1 (7439395..7499627, complement)
    101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844293.1 (1487227..1492850, complement)

    Chromosome 13 - NC_047046.1Genomic Context describing neighboring genes Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 Neighboring gene leucine rich repeat containing 43 Neighboring gene U2 spliceosomal RNA Neighboring gene BAF chromatin remodeling complex subunit BCL7A Neighboring gene cilia and flagella associated protein 251

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MLX-interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTurTru1.mat.Y Primary Assembly

    Genomic

    1. NC_047046.1 Reference mTurTru1.mat.Y Primary Assembly

      Range
      7439395..7499627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033836825.1 → XP_033692716.1  MLX-interacting protein isoform X3

      UniProtKB/TrEMBL
      A0A6J3PRZ2
      Related
      ENSTTRP00000002839.2, ENSTTRT00000003024.2
      Conserved Domains (2) summary
      PHA03247
      Location:348 → 707
      PHA03247; large tegument protein UL36; Provisional
      cd19688
      Location:726 → 795
      bHLHzip_MLXIP; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in MLX-interacting protein (MLXIP) and similar proteins

    2. XM_033836824.1 → XP_033692715.1  MLX-interacting protein isoform X2

      UniProtKB/TrEMBL
      A0A6J3PRG5
      Conserved Domains (2) summary
      PHA03247
      Location:339 → 711
      PHA03247; large tegument protein UL36; Provisional
      cd19688
      Location:729 → 798
      bHLHzip_MLXIP; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in MLX-interacting protein (MLXIP) and similar proteins

    3. XM_033836823.1 → XP_033692714.1  MLX-interacting protein isoform X1

      UniProtKB/TrEMBL
      A0A6J3PRB2
      Conserved Domains (2) summary
      PHA03247
      Location:348 → 720
      PHA03247; large tegument protein UL36; Provisional
      cd19688
      Location:738 → 807
      bHLHzip_MLXIP; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in MLX-interacting protein (MLXIP) and similar proteins

    RNA

    1. XR_004521385.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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