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    barx2 BARX homeobox 2 [ Takifugu rubripes (torafugu) ]

    Gene ID: 101070750, updated on 8-Mar-2024

    Summary

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    Gene symbol
    barx2
    Gene description
    BARX homeobox 2
    See related
    Ensembl:ENSTRUG00000008590
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Orthologs
    human zebrafish all
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    Genomic context

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    See barx2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 11 NC_042295.1 (4083250..4091895, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) 11 NC_018900.1 (1352919..1361572, complement)

    Chromosome 11 - NC_042295.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115251525 Neighboring gene kirre like nephrin family adhesion molecule 3b Neighboring gene RNA binding motif protein 7 Neighboring gene eukaryotic translation initiation factor 4 gamma 3-like Neighboring gene uncharacterized LOC115251462

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein BarH-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042295.1 Reference fTakRub1.2 Primary Assembly

      Range
      4083250..4091895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003968271.3 → XP_003968320.2  homeobox protein BarH-like 2

      UniProtKB/TrEMBL
      H2TA62
      Related
      ENSTRUP00000021552.3, ENSTRUT00000021640.3
      Conserved Domains (1) summary
      pfam00046
      Location:138 → 192
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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