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    esrrga estrogen-related receptor gamma a [ Takifugu rubripes (torafugu) ]

    Gene ID: 101069149, updated on 8-Mar-2024

    Summary

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    Gene symbol
    esrrga
    Gene description
    estrogen-related receptor gamma a
    See related
    Ensembl:ENSTRUG00000001481
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Also known as
    esrrg
    Orthologs
    zebrafish all
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    Genomic context

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    See esrrga in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 13 NC_042297.1 (7616274..7681842)
    101 previous assembly FUGU5 (GCF_000180615.1) 13 NC_018902.1 (4524484..4566037)

    Chromosome 13 - NC_042297.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115252098 Neighboring gene spermatogenesis associated 17 Neighboring gene Usher syndrome 2A (autosomal recessive, mild) Neighboring gene potassium channel tetramerization domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear steroid receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    estrogen-related receptor gamma
    Names
    estrogen related receptor gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042297.1 Reference fTakRub1.2 Primary Assembly

      Range
      7616274..7681842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029846443.1 → XP_029702303.1  estrogen-related receptor gamma isoform X3

    2. XM_029846442.1 → XP_029702302.1  estrogen-related receptor gamma isoform X2

    3. XM_011609671.2 → XP_011607973.2  estrogen-related receptor gamma isoform X1

      UniProtKB/TrEMBL
      H2RTE2
      Related
      ENSTRUP00000003409.3, ENSTRUT00000003428.3
      Conserved Domains (2) summary
      cd06946
      Location:300 → 519
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:178 → 274
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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