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    EHF ETS homologous factor [ Sarcophilus harrisii (Tasmanian devil) ]

    Gene ID: 100921281, updated on 8-Mar-2024

    Summary

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    Gene symbol
    EHF
    Gene description
    ETS homologous factor
    See related
    Ensembl:ENSSHAG00000010046
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sarcophilus harrisii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
    Orthologs
    human mouse all
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    Genomic context

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    See EHF in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current mSarHar1.11 (GCF_902635505.1) 6 NC_045431.1 (220558944..220635092)
    102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 6 Unlocalized Scaffold NW_003846899.1 (578266..665868)

    Chromosome 6 - NC_045431.1Genomic Context describing neighboring genes Neighboring gene catalase Neighboring gene E74 like ETS transcription factor 5 Neighboring gene glia maturation factor beta pseudogene Neighboring gene APAF1 interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ETS homologous factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSarHar1.11 Primary Assembly

    Genomic

    1. NC_045431.1 Reference mSarHar1.11 Primary Assembly

      Range
      220558944..220635092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031944143.1 → XP_031800003.1  ETS homologous factor isoform X1

      UniProtKB/TrEMBL
      A0A7N4V6U9, G3W8E1
      Related
      ENSSHAP00000043662.1, ENSSHAT00000024222.1
      Conserved Domains (2) summary
      cd08539
      Location:79 → 156
      SAM_PNT-ESE-3-like; Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators
      smart00413
      Location:245 → 332
      ETS; erythroblast transformation specific domain

    2. XM_031944144.1 → XP_031800004.1  ETS homologous factor isoform X1

      UniProtKB/TrEMBL
      A0A7N4V6U9, G3W8E1
      Conserved Domains (2) summary
      cd08539
      Location:79 → 156
      SAM_PNT-ESE-3-like; Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators
      smart00413
      Location:245 → 332
      ETS; erythroblast transformation specific domain

    3. XM_031944146.1 → XP_031800006.1  ETS homologous factor isoform X1

      UniProtKB/TrEMBL
      A0A7N4V6U9, G3W8E1
      Conserved Domains (2) summary
      cd08539
      Location:79 → 156
      SAM_PNT-ESE-3-like; Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators
      smart00413
      Location:245 → 332
      ETS; erythroblast transformation specific domain

    4. XM_031944147.1 → XP_031800007.1  ETS homologous factor isoform X2

      UniProtKB/TrEMBL
      G3W8E1
      Related
      ENSSHAP00000043599.1, ENSSHAT00000050316.1
      Conserved Domains (2) summary
      smart00413
      Location:205 → 292
      ETS; erythroblast transformation specific domain
      cl15755
      Location:39 → 116
      SAM_superfamily; SAM (Sterile alpha motif )

    5. XM_031944145.1 → XP_031800005.1  ETS homologous factor isoform X1

      UniProtKB/TrEMBL
      A0A7N4V6U9, G3W8E1
      Conserved Domains (2) summary
      cd08539
      Location:79 → 156
      SAM_PNT-ESE-3-like; Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators
      smart00413
      Location:245 → 332
      ETS; erythroblast transformation specific domain
    Nucleotide Protein
    Heading Accession and Version

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