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    TSC22D4 TSC22 domain family member 4 [ Sarcophilus harrisii (Tasmanian devil) ]

    Gene ID: 100925792, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TSC22D4
    Gene description
    TSC22 domain family member 4
    See related
    Ensembl:ENSSHAG00000010016
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sarcophilus harrisii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
    Orthologs
    human mouse all
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    Genomic context

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    See TSC22D4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (287740199..287751382, complement)
    102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838874.1 (623319..634480)

    Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 35 Neighboring gene sperm acrosome developmental regulator Neighboring gene neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 Neighboring gene ArfGAP with FG repeats 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to osmotic stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TSC22 domain family protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSarHar1.11 Primary Assembly

    Genomic

    1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

      Range
      287740199..287751382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012548811.3 → XP_012404265.1  TSC22 domain family protein 4

      UniProtKB/TrEMBL
      A0A7N4NPT4, G3W8A5
      Related
      ENSSHAP00000026650.1, ENSSHAT00000045853.1
      Conserved Domains (1) summary
      pfam01166
      Location:319 → 373
      TSC22; TSC-22/dip/bun family

    2. XM_023502801.2 → XP_023358569.1  TSC22 domain family protein 4

      UniProtKB/TrEMBL
      A0A7N4NPT4, G3W8A5
      Conserved Domains (1) summary
      pfam01166
      Location:319 → 373
      TSC22; TSC-22/dip/bun family
    Nucleotide Protein
    Heading Accession and Version

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