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    ZNF541 zinc finger protein 541 [ Sorex araneus (European shrew) ]

    Gene ID: 101552625, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ZNF541
    Gene description
    zinc finger protein 541
    See related
    EnsemblRapid:ENSSARG00000013713
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorex araneus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF541 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 8 NC_073309.1 (50426266..50444497, complement)
    101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545883.1 (23968045..23982687)

    Chromosome 8 - NC_073309.1Genomic Context describing neighboring genes Neighboring gene kaptin, actin binding protein Neighboring gene NSF attachment protein alpha Neighboring gene BRD4 interacting chromatin remodeling complex associated protein Neighboring gene EH domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 541

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSorAra2.pri

    Genomic

    1. NC_073309.1 Reference mSorAra2.pri

      Range
      50426266..50444497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004607700.2 → XP_004607757.2  zinc finger protein 541

      Related
      ENSSARP00000012380.2, ENSSART00000013711.2
    Nucleotide Protein
    Heading Accession and Version

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