ZSCAN12 zinc finger and SCAN domain containing 12 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ZSCAN12provided by VGNC
Official Full Name: zinc finger and SCAN domain containing 12provided by VGNC
Primary source: VGNC:VGNC:7949
Locus tag: CK820_G0006615
See related: Ensembl:ENSPTRG00000023946
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as: ZNF96
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 5

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	5	NC_072403.2 (34326942..34347952, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	6	NC_072404.1 (34326949..34347914, complement)

Chromosome 5 - NC_072403.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

D6S2226 (e-PCR)
- UniSTS:239107

D6S2216 (e-PCR)
- UniSTS:239108

D6S2215 (e-PCR)
- UniSTS:239109

D6S2303 (e-PCR)
- UniSTS:60677

RH93781 (e-PCR)
- UniSTS:88078

RH66138 (e-PCR)
- UniSTS:79429

D6S2279 (e-PCR)
- UniSTS:37210

D6S2215 (e-PCR)
- UniSTS:480382

D6S2216 (e-PCR)
- UniSTS:480383

RH102305 (e-PCR)
- UniSTS:96639

D6S2226 (e-PCR)
- UniSTS:480384

D6S2302 (e-PCR)
- UniSTS:62600

D6S2215 (e-PCR)
- UniSTS:480419

RH102110 (e-PCR)
- UniSTS:96444

RH66545 (e-PCR)
- UniSTS:59585

D6S2278 (e-PCR)
- UniSTS:31459

RH63707 (e-PCR)
- UniSTS:47341

RH98837 (e-PCR)
- UniSTS:91643

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: zinc finger and SCAN domain-containing protein 12

Names: Zinc finger and SCAN domain-containing protein 12; zinc finger protein 96

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

34326942..34347952 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054685656.2 → XP_054541631.1 zinc finger and SCAN domain-containing protein 12

UniProtKB/TrEMBL

K7A5W6
XM_024357094.3 → XP_024212862.1 zinc finger and SCAN domain-containing protein 12

UniProtKB/TrEMBL

K7A5W6

Conserved Domains (3) summary

smart00431
Location:42 → 152

SCAN; leucine rich region

COG5048
Location:299 → 604

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:499 → 519

ZF_C2H2; C2H2 Zn finger [structural motif]