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    FOXL1 forkhead box L1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100443704, updated on 3-Apr-2024

    Summary

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    Gene symbol
    FOXL1
    Gene description
    forkhead box L1
    Locus tag
    CR201_G0036749
    See related
    Ensembl:ENSPPYG00000007626
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See FOXL1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 18 NC_072003.2 (85988344..86002041)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 16 NC_072001.1 (85401525..85415222)

    Chromosome 18 - NC_072003.2Genomic Context describing neighboring genes Neighboring gene methenyltetrahydrofolate synthetase domain containing Neighboring gene forkhead box C2 Neighboring gene uncharacterized LOC103892726 Neighboring gene uncharacterized LOC129050966 Neighboring gene uncharacterized LOC129050868

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein L1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072003.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      85988344..86002041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024234068.2 → XP_024089836.1  forkhead box protein L1

      UniProtKB/TrEMBL
      A0A2J8T9E2, H2NRQ1
      Conserved Domains (1) summary
      smart00339
      Location:49 → 137
      FH; FORKHEAD

    2. XM_063717400.1 → XP_063573470.1  forkhead box protein L1

      UniProtKB/TrEMBL
      A0A2J8T9E2, H2NRQ1

    3. XM_024234066.3 → XP_024089834.1  forkhead box protein L1

      UniProtKB/TrEMBL
      A0A2J8T9E2, H2NRQ1
      Conserved Domains (1) summary
      smart00339
      Location:49 → 137
      FH; FORKHEAD
    Nucleotide Protein
    Heading Accession and Version

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