U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    IRX2 iroquois homeobox 2 [ Otolemur garnettii (small-eared galago) ]

    Gene ID: 100942983, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    IRX2
    Gene description
    iroquois homeobox 2
    See related
    Ensembl:ENSOGAG00000012910
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Otolemur garnettii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IRX2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852621.1 (1823856..1829546, complement)

    NW_003852621.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit S6 Neighboring gene iroquois homeobox 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_003852621 Unplaced Scaffold Reference OtoGar3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    iroquois-class homeodomain protein IRX-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OtoGar3

    Genomic

    1. NW_003852621.1 Reference OtoGar3

      Range
      1823856..1829546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023508179.1 → XP_023363947.1  iroquois-class homeodomain protein IRX-2

      UniProtKB/TrEMBL
      H0X7Z9
      Related
      ENSOGAP00000011572.2, ENSOGAT00000012912.2
      Conserved Domains (1) summary
      pfam05920
      Location:132 → 171
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.