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    ESRRB estrogen related receptor beta [ Ornithorhynchus anatinus (platypus) ]

    Gene ID: 100090548, updated on 30-Apr-2024

    Summary

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    Gene symbol
    ESRRB
    Gene description
    estrogen related receptor beta
    See related
    Ensembl:ENSOANG00000030201
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ornithorhynchus anatinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
    Orthologs
    human mouse all
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    Genomic context

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    See ESRRB in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    105 current mOrnAna1.pri.v4 (GCF_004115215.2) 1 NC_041728.1 (39947826..40164032)

    Chromosome 1 - NC_041728.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 43 Neighboring gene G-patch domain containing 2 like Neighboring gene uncharacterized LOC114814134 Neighboring gene U6 spliceosomal RNA Neighboring gene vasohibin 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041728.1 Chromosome 1 Reference mOrnAna1.pri.v4 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear steroid receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retinoic acid receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    steroid hormone receptor ERR2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrnAna1.pri.v4 Primary Assembly

    Genomic

    1. NC_041728.1 Reference mOrnAna1.pri.v4 Primary Assembly

      Range
      39947826..40164032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029071453.2 → XP_028927286.1  steroid hormone receptor ERR2 isoform X2

      UniProtKB/TrEMBL
      A0A6I8N7X0
      Conserved Domains (2) summary
      cd06946
      Location:208 → 427
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:94 → 189
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    2. XM_029071452.2 → XP_028927285.1  steroid hormone receptor ERR2 isoform X1

      UniProtKB/TrEMBL
      A0A6I8N7X0, K7E6N5
      Related
      ENSOANP00000029192.2
      Conserved Domains (2) summary
      cd06946
      Location:213 → 432
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 194
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    3. XM_029071456.2 → XP_028927289.1  steroid hormone receptor ERR2 isoform X4

      Conserved Domains (2) summary
      cd06946
      Location:52 → 271
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cl02596
      Location:1 → 33
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

    4. XM_029071455.2 → XP_028927288.1  steroid hormone receptor ERR2 isoform X3

      Conserved Domains (2) summary
      cd06946
      Location:72 → 291
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cl02596
      Location:32 → 53
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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