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    LOC101679280 zinc finger protein 197 [ Mustela putorius furo (domestic ferret) ]

    Gene ID: 101679280, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC101679280
    Gene description
    zinc finger protein 197
    See related
    Ensembl:ENSMPUG00000002775
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mustela putorius furo (sub-species: furo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
    Also known as
    ZNF197
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    Genomic context

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    See LOC101679280 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422002.1 (18801122..18833632)
    101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569538.1 (51962..104304, complement)

    NW_025422002.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 41 member 3 Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene zinc finger protein 660 Neighboring gene zinc finger protein 35 Neighboring gene uncharacterized LOC101679088

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 197

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1176430v1.1 Primary Assembly

    Genomic

    1. NW_025422002.1 Reference ASM1176430v1.1 Primary Assembly

      Range
      18801122..18833632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045063414.1 → XP_044919349.1  zinc finger protein 197 isoform X3

      UniProtKB/TrEMBL
      A0A8U0RB13
      Conserved Domains (3) summary
      cd07765
      Location:14 → 53
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:332 → 735
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:196 → 216
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_013050482.2 → XP_012905936.1  zinc finger protein 197 isoform X1

      UniProtKB/TrEMBL
      M3XUJ7
      Related
      ENSMPUP00000002747.1
      Conserved Domains (5) summary
      smart00431
      Location:41 → 153
      SCAN; leucine rich region
      COG5048
      Location:538 → 941
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:402 → 422
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:219 → 259
      KRAB; KRAB box
      pfam13465
      Location:442 → 467
      zf-H2C2_2; Zinc-finger double domain

    3. XM_045063413.1 → XP_044919348.1  zinc finger protein 197 isoform X2

      UniProtKB/TrEMBL
      A0A8U0ULA3
      Conserved Domains (3) summary
      cd07765
      Location:73 → 112
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:391 → 794
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:255 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_013050486.2 → XP_012905940.2  zinc finger protein 197 isoform X1

      UniProtKB/TrEMBL
      M3XUJ7
      Conserved Domains (5) summary
      smart00431
      Location:41 → 153
      SCAN; leucine rich region
      COG5048
      Location:538 → 941
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:402 → 422
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:219 → 259
      KRAB; KRAB box
      pfam13465
      Location:442 → 467
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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