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    E2F6 E2F transcription factor 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697311, updated on 17-Aug-2024

    Summary

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    Official Symbol
    E2F6provided by VGNC
    Official Full Name
    E2F transcription factor 6provided by VGNC
    Primary source
    VGNC:VGNC:72027
    See related
    Ensembl:ENSMMUG00000023225
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See E2F6 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (97317190..97337766)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (11430380..11451067, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene 5S ribosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC114671770 Neighboring gene uncharacterized LOC114671771

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor E2F6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266655.1 → NP_001253584.1  transcription factor E2F6

      See identical proteins and their annotated locations for NP_001253584.1

      Status: PROVISIONAL

      Source sequence(s)
      JV635866
      UniProtKB/TrEMBL
      F7EAE0, G7NBA8, I0FPR0
      Related
      ENSMMUP00000030569.3, ENSMMUT00000032669.4
      Conserved Domains (2) summary
      cd14660
      Location:139 → 239
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:65 → 128
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      97317190..97337766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111695.2 → XP_014967181.1  transcription factor E2F6 isoform X2

      UniProtKB/TrEMBL
      H9F7A1
      Conserved Domains (2) summary
      cd14660
      Location:64 → 164
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:1 → 53
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    2. XM_015111697.2 → XP_014967183.1  transcription factor E2F6 isoform X3

      Conserved Domains (1) summary
      cd14660
      Location:1 → 87
      E2F_DD; Dimerization domain of E2F transcription factors

    3. XM_015111696.2 → XP_014967182.1  transcription factor E2F6 isoform X2

      UniProtKB/TrEMBL
      H9F7A1
      Conserved Domains (2) summary
      cd14660
      Location:64 → 164
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:1 → 53
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    4. XM_015111694.2 → XP_014967180.1  transcription factor E2F6 isoform X1

      Conserved Domains (2) summary
      cd14660
      Location:139 → 217
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:65 → 128
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    5. XM_028831445.1 → XP_028687278.1  transcription factor E2F6 isoform X3

      Conserved Domains (1) summary
      cd14660
      Location:1 → 87
      E2F_DD; Dimerization domain of E2F transcription factors
    Nucleotide Protein
    Heading Accession and Version

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