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    TBX20 T-box transcription factor 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707576, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TBX20provided by VGNC
    Official Full Name
    T-box transcription factor 20provided by VGNC
    Primary source
    VGNC:VGNC:78270
    Locus tag
    EGK_13780
    See related
    Ensembl:ENSMMUG00000012549
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TBX20 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (79820896..79875365)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (73445360..73497837)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997460 Neighboring gene uncharacterized LOC106997457 Neighboring gene uncharacterized LOC114676938 Neighboring gene probable C-mannosyltransferase DPY19L2 Neighboring gene protein S100-A11 pseudogene Neighboring gene uncharacterized LOC114676939

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart looping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vasculogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-box transcription factor TBX20
    Names
    T-box 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      79820896..79875365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001105053.4 → XP_001105053.2  T-box transcription factor TBX20

      See identical proteins and their annotated locations for XP_001105053.2

      UniProtKB/TrEMBL
      A0A663DG81, A0A8J8YK47, F7E831, G7MLI0
      Related
      ENSMMUP00000016474.3, ENSMMUT00000017592.4
      Conserved Domains (2) summary
      pfam05872
      Location:357 → 409
      DUF853; Bacterial protein of unknown function (DUF853)
      cd20193
      Location:100 → 289
      T-box_TBX20-like; DNA-binding domain of T-box transcription factor 20 and related T-box proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials