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    ZKSCAN7 zinc finger with KRAB and SCAN domains 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715300, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZKSCAN7provided by VGNC
    Official Full Name
    zinc finger with KRAB and SCAN domains 7provided by VGNC
    Primary source
    VGNC:VGNC:82274
    See related
    Ensembl:ENSMMUG00000011943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZKSCAN7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (100546303..100569775)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (98012516..98029842, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 445 Neighboring gene zinc finger protein 852 Neighboring gene etoposide-induced protein 2.4-like Neighboring gene uncharacterized LOC114676178 Neighboring gene zinc finger protein 660 Neighboring gene zinc finger protein 197 Neighboring gene zinc finger protein 35

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein with KRAB and SCAN domains 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      100546303..100569775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844021.1 → XP_028699854.1  zinc finger protein with KRAB and SCAN domains 7 isoform X4

      Conserved Domains (3) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      pfam14967
      Location:156 → 256
      FAM70; FAM70 protein
      pfam01352
      Location:224 → 264
      KRAB; KRAB box

    2. XM_028844020.1 → XP_028699853.1  zinc finger protein with KRAB and SCAN domains 7 isoform X4

      Conserved Domains (3) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      pfam14967
      Location:156 → 256
      FAM70; FAM70 protein
      pfam01352
      Location:224 → 264
      KRAB; KRAB box

    3. XM_015131198.2 → XP_014986684.2  zinc finger protein with KRAB and SCAN domains 7 isoform X1

      UniProtKB/TrEMBL
      F7HKJ0
      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:373 → 731
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:630 → 650
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_028844019.1 → XP_028699852.1  zinc finger protein with KRAB and SCAN domains 7 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:222 → 580
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:479 → 499
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:74 → 114
      KRAB; KRAB box

    5. XM_028844017.1 → XP_028699850.1  zinc finger protein with KRAB and SCAN domains 7 isoform X1

      UniProtKB/TrEMBL
      F7HKJ0
      Related
      ENSMMUP00000015660.4, ENSMMUT00000016724.4
      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:373 → 731
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:630 → 650
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_028844018.1 → XP_028699851.1  zinc finger protein with KRAB and SCAN domains 7 isoform X2

      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:372 → 730
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:629 → 649
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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