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    ST18 ST18 C2H2C-type zinc finger transcription factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709973, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ST18provided by VGNC
    Official Full Name
    ST18 C2H2C-type zinc finger transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:77959
    See related
    Ensembl:ENSMMUG00000008439
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ST18 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (52705503..53013109, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (49174349..49532448)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680411 Neighboring gene uncharacterized LOC114680412 Neighboring gene uncharacterized LOC114680247 Neighboring gene uncharacterized LOC106999764 Neighboring gene uncharacterized LOC106999762 Neighboring gene ALK and LTK ligand 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    suppression of tumorigenicity 18 protein
    Names
    ST18, C2H2C-type zinc finger
    suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      52705503..53013109 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852668.1 → XP_028708501.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    2. XM_015145350.2 → XP_015000836.2  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    3. XM_015145347.2 → XP_015000833.2  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    4. XM_015145346.2 → XP_015000832.2  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    5. XM_028852671.1 → XP_028708504.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Related
      ENSMMUP00000056934.2, ENSMMUT00000066457.2
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    6. XM_028852669.1 → XP_028708502.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Related
      ENSMMUP00000079271.1, ENSMMUT00000086533.1
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    7. XM_028852670.1 → XP_028708503.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    8. XM_028852666.1 → XP_028708499.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    9. XM_015145349.2 → XP_015000835.2  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    10. XM_028852667.1 → XP_028708500.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    11. XM_015145351.2 → XP_015000837.2  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type

    12. XM_028852665.1 → XP_028708498.1  suppression of tumorigenicity 18 protein

      UniProtKB/TrEMBL
      H9G2C9
      Conserved Domains (3) summary
      pfam07888
      Location:921 → 992
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      pfam08474
      Location:479 → 715
      MYT1; Myelin transcription factor 1
      pfam01530
      Location:767 → 795
      zf-C2HC; Zinc finger, C2HC type
    Nucleotide Protein
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