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    ZNF496 zinc finger protein 496 [ Myotis lucifugus (little brown bat) ]

    Gene ID: 102423121, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ZNF496
    Gene description
    zinc finger protein 496
    See related
    Ensembl:ENSMLUG00000026878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis lucifugus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF496 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871350.1 (1027870..1094429, complement)

    NW_005871350.1Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 47 Neighboring gene beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like Neighboring gene jumonji domain containing 4 Neighboring gene small nucleolar RNA SNORA4 Neighboring gene polyadenylate-binding protein 4-like Neighboring gene small nucleolar RNA SNORA33 Neighboring gene sal-like protein 4 pseudogene Neighboring gene NLR family pyrin domain containing 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005871350 Unplaced Scaffold Reference Myoluc2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 496

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Myoluc2.0

    Genomic

    1. NW_005871350.1 Reference Myoluc2.0

      Range
      1027870..1094429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014465606.2 → XP_014321092.1  zinc finger protein 496 isoform X4

      Conserved Domains (3) summary
      cd07765
      Location:222 → 259
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      sd00017
      Location:408 → 428
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02023
      Location:50 → 126
      SCAN; SCAN domain

    2. XM_023763829.1 → XP_023619597.1  zinc finger protein 496 isoform X1

      UniProtKB/TrEMBL
      G1Q3D9
      Related
      ENSMLUP00000018222.1, ENSMLUT00000028149.1
      Conserved Domains (4) summary
      cd07765
      Location:222 → 259
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:512 → 586
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:408 → 428
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02023
      Location:50 → 126
      SCAN; SCAN domain

    3. XM_014465604.2 → XP_014321090.1  zinc finger protein 496 isoform X2

      Conserved Domains (5) summary
      cd07765
      Location:202 → 239
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:492 → 566
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:388 → 408
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:533 → 555
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:30 → 106
      SCAN; SCAN domain

    4. XM_023763830.1 → XP_023619598.1  zinc finger protein 496 isoform X3

      Conserved Domains (5) summary
      cd07765
      Location:193 → 230
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:483 → 557
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:379 → 399
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:524 → 546
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:50 → 106
      SCAN; SCAN domain

    5. XM_014465603.2 → XP_014321089.1  zinc finger protein 496 isoform X1

      UniProtKB/TrEMBL
      G1Q3D9
      Conserved Domains (4) summary
      cd07765
      Location:222 → 259
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:512 → 586
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:408 → 428
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02023
      Location:50 → 126
      SCAN; SCAN domain

    6. XM_023763828.1 → XP_023619596.1  zinc finger protein 496 isoform X1

      UniProtKB/TrEMBL
      G1Q3D9
      Conserved Domains (4) summary
      cd07765
      Location:222 → 259
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:512 → 586
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:408 → 428
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02023
      Location:50 → 126
      SCAN; SCAN domain
    Nucleotide Protein
    Heading Accession and Version

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