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    LOC102424720 signal transducer and activator of transcription 5B [ Myotis lucifugus (little brown bat) ]

    Gene ID: 102424720, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC102424720
    Gene description
    signal transducer and activator of transcription 5B
    See related
    Ensembl:ENSMLUG00000012050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis lucifugus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Also known as
    STAT5B
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    Genomic context

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    See LOC102424720 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871148.1 (1507068..1563404)

    NW_005871148.1Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 3 Neighboring gene signal transducer and activator of transcription 5A Neighboring gene uncharacterized LOC106697748 Neighboring gene GH3 domain containing Neighboring gene hypocretin neuropeptide precursor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005871148 Unplaced Scaffold Reference Myoluc2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in growth hormone receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to peptide hormone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal transducer and activator of transcription 5B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Myoluc2.0

    Genomic

    1. NW_005871148.1 Reference Myoluc2.0

      Range
      1507068..1563404
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006092376.3 → XP_006092438.1  signal transducer and activator of transcription 5B isoform X1

      UniProtKB/TrEMBL
      G1PJQ0
      Conserved Domains (4) summary
      cd10420
      Location:582 → 725
      SH2_STAT5b; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 5b proteins
      pfam01017
      Location:150 → 339
      STAT_alpha; STAT protein, all-alpha domain
      pfam02864
      Location:341 → 591
      STAT_bind; STAT protein, DNA binding domain
      pfam02865
      Location:65 → 133
      STAT_int; STAT protein, protein interaction domain

    2. XM_006092377.3 → XP_006092439.1  signal transducer and activator of transcription 5B isoform X2

      UniProtKB/TrEMBL
      G1PJQ0
      Conserved Domains (4) summary
      cd10420
      Location:581 → 724
      SH2_STAT5b; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 5b proteins
      pfam01017
      Location:149 → 338
      STAT_alpha; STAT protein, all-alpha domain
      pfam02864
      Location:340 → 590
      STAT_bind; STAT protein, DNA binding domain
      pfam02865
      Location:64 → 132
      STAT_int; STAT protein, protein interaction domain

    3. XM_023756910.1 → XP_023612678.1  signal transducer and activator of transcription 5B isoform X4

      UniProtKB/TrEMBL
      G1PJQ0
      Conserved Domains (4) summary
      pfam01017
      Location:150 → 339
      STAT_alpha; STAT protein, all-alpha domain
      pfam02864
      Location:341 → 591
      STAT_bind; STAT protein, DNA binding domain
      pfam02865
      Location:65 → 133
      STAT_int; STAT protein, protein interaction domain
      cl15255
      Location:582 → 702
      SH2; Src homology 2 (SH2) domain

    4. XM_006092379.3 → XP_006092441.1  signal transducer and activator of transcription 5B isoform X3

      See identical proteins and their annotated locations for XP_006092441.1

      UniProtKB/TrEMBL
      G1PJQ0
      Conserved Domains (4) summary
      cd10420
      Location:573 → 716
      SH2_STAT5b; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 5b proteins
      pfam01017
      Location:141 → 330
      STAT_alpha; STAT protein, all-alpha domain
      pfam02864
      Location:332 → 582
      STAT_bind; STAT protein, DNA binding domain
      pfam02865
      Location:2 → 124
      STAT_int; STAT protein, protein interaction domain

    5. XM_006092378.3 → XP_006092440.1  signal transducer and activator of transcription 5B isoform X3

      See identical proteins and their annotated locations for XP_006092440.1

      UniProtKB/TrEMBL
      G1PJQ0
      Related
      ENSMLUP00000010987.2, ENSMLUT00000012060.2
      Conserved Domains (4) summary
      cd10420
      Location:573 → 716
      SH2_STAT5b; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 5b proteins
      pfam01017
      Location:141 → 330
      STAT_alpha; STAT protein, all-alpha domain
      pfam02864
      Location:332 → 582
      STAT_bind; STAT protein, DNA binding domain
      pfam02865
      Location:2 → 124
      STAT_int; STAT protein, protein interaction domain

    RNA

    1. XR_002830123.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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