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    ARID2 AT-rich interaction domain 2 [ Myotis lucifugus (little brown bat) ]

    Gene ID: 102420238, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ARID2
    Gene description
    AT-rich interaction domain 2
    See related
    Ensembl:ENSMLUG00000006908
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis lucifugus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See ARID2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871139.1 (486505..669749)

    NW_005871139.1Genomic Context describing neighboring genes Neighboring gene anoctamin 6 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene serologically defined colon cancer antigen 3 homolog pseudogene Neighboring gene SR-related CTD associated factor 11 Neighboring gene dnaJ homolog subfamily B member 1 pseudogene Neighboring gene solute carrier family 38 member 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005871139 Unplaced Scaffold Reference Myoluc2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF superfamily-type complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-rich interactive domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Myoluc2.0

    Genomic

    1. NW_005871139.1 Reference Myoluc2.0

      Range
      486505..669749
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006091453.3 → XP_006091515.1  AT-rich interactive domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      G1P845
      Related
      ENSMLUP00000006324.2, ENSMLUT00000006920.2
      Conserved Domains (2) summary
      pfam09606
      Location:485 → 869
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam02257
      Location:372 → 452
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_023756276.1 → XP_023612044.1  AT-rich interactive domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      G1P845
      Conserved Domains (2) summary
      pfam02257
      Location:378 → 458
      RFX_DNA_binding; RFX DNA-binding domain
      cl26464
      Location:461 → 768
      Atrophin-1; Atrophin-1 family

    3. XM_023756277.1 → XP_023612045.1  AT-rich interactive domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      G1P845
      Conserved Domains (2) summary
      pfam02257
      Location:194 → 274
      RFX_DNA_binding; RFX DNA-binding domain
      cl26464
      Location:277 → 584
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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