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    ELF2 E74 like ETS transcription factor 2 [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100676322, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ELF2
    Gene description
    E74 like ETS transcription factor 2
    See related
    EnsemblRapid:ENSLAFG00000017189
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    human mouse all
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    Genomic context

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    See ELF2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 5 NC_087346.1 (2172824..2314792)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573434.1 (54355516..54455729, complement)

    Chromosome 5 - NC_087346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111750805 Neighboring gene mitochondria localized glutamic acid rich protein Neighboring gene nocturnin Neighboring gene large ribosomal subunit protein eL22-like Neighboring gene uncharacterized LOC111750803 Neighboring gene solute carrier family 7 member 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ETS-related transcription factor Elf-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087346.1 Reference mLoxAfr1.hap2

      Range
      2172824..2314792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064285311.1 → XP_064141381.1  ETS-related transcription factor Elf-2 isoform X1

      UniProtKB/TrEMBL
      G3TIE0

    2. XM_064285314.1 → XP_064141384.1  ETS-related transcription factor Elf-2 isoform X3

    3. XM_064285310.1 → XP_064141380.1  ETS-related transcription factor Elf-2 isoform X1

      UniProtKB/TrEMBL
      G3TIE0

    4. XM_064285313.1 → XP_064141383.1  ETS-related transcription factor Elf-2 isoform X2

    5. XM_064285315.1 → XP_064141385.1  ETS-related transcription factor Elf-2 isoform X6

    6. XM_064285312.1 → XP_064141382.1  ETS-related transcription factor Elf-2 isoform X1

      UniProtKB/TrEMBL
      G3TIE0

    7. XM_064285317.1 → XP_064141387.1  ETS-related transcription factor Elf-2 isoform X6

    8. XM_023548685.2 → XP_023404453.1  ETS-related transcription factor Elf-2 isoform X6

      Conserved Domains (1) summary
      smart00413
      Location:103 → 185
      ETS; erythroblast transformation specific domain

    9. XM_010590565.3 → XP_010588867.1  ETS-related transcription factor Elf-2 isoform X5

      Related
      ENSLAFP00000041666.1, ENSLAFT00000038075.1
      Conserved Domains (2) summary
      pfam00178
      Location:138 → 217
      Ets; Ets-domain
      pfam12310
      Location:20 → 48
      Elf-1_N; Transcription factor protein N terminal

    10. XM_003410440.4 → XP_003410488.1  ETS-related transcription factor Elf-2 isoform X4

      Related
      ENSLAFP00000014412.4, ENSLAFT00000017188.4
      Conserved Domains (2) summary
      pfam00178
      Location:150 → 229
      Ets; Ets-domain
      pfam12310
      Location:20 → 48
      Elf-1_N; Transcription factor protein N terminal
    Nucleotide Protein
    Heading Accession and Version

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