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    ZNF280D zinc finger protein 280D [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100656813, updated on 11-Apr-2024

    Summary

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    Gene symbol
    ZNF280D
    Gene description
    zinc finger protein 280D
    See related
    EnsemblRapid:ENSLAFG00000005060
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF280D in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 13 NC_087354.1 (59154041..59284923)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573479.1 (2427067..2524586, complement)

    Chromosome 13 - NC_087354.1Genomic Context describing neighboring genes Neighboring gene cingulin like 1 Neighboring gene transcription factor 12 Neighboring gene uncharacterized LOC135227278 Neighboring gene meiosis specific nuclear structural 1 Neighboring gene testis expressed 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 280D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087354.1 Reference mLoxAfr1.hap2

      Range
      59154041..59284923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064267503.1 → XP_064123573.1  zinc finger protein 280D isoform X1

    2. XM_064267505.1 → XP_064123575.1  zinc finger protein 280D isoform X1

    3. XM_064267507.1 → XP_064123577.1  zinc finger protein 280D isoform X2

    4. XM_064267502.1 → XP_064123572.1  zinc finger protein 280D isoform X1

      Related
      ENSLAFP00000004235.5, ENSLAFT00000005061.5

    5. XM_064267508.1 → XP_064123578.1  zinc finger protein 280D isoform X3

    6. XM_064267504.1 → XP_064123574.1  zinc finger protein 280D isoform X1

    7. XM_064267506.1 → XP_064123576.1  zinc finger protein 280D isoform X2

    8. XM_064267509.1 → XP_064123579.1  zinc finger protein 280D isoform X4

    9. XM_064267510.1 → XP_064123580.1  zinc finger protein 280D isoform X5

    10. XM_064267512.1 → XP_064123582.1  zinc finger protein 280D isoform X7

    11. XM_064267511.1 → XP_064123581.1  zinc finger protein 280D isoform X6

    Nucleotide Protein
    Heading Accession and Version

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