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    KLF5 KLF transcription factor 5 [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100657633, updated on 11-Apr-2024

    Summary

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    Gene symbol
    KLF5
    Gene description
    KLF transcription factor 5
    See related
    EnsemblRapid:ENSLAFG00000002268
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    human mouse all
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    Genomic context

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    See KLF5 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 17 NC_087358.1 (34487628..34510247, complement)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573431.1 (34403607..34422042, complement)

    Chromosome 17 - NC_087358.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 12 Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene transmembrane protein 53-like Neighboring gene progesterone immunomodulatory binding factor 1 Neighboring gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease Neighboring gene BORA aurora kinase A activator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Krueppel-like factor 5
    Names
    Kruppel like factor 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087358.1 Reference mLoxAfr1.hap2

      Range
      34487628..34510247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003409432.3 → XP_003409480.1  Krueppel-like factor 5

      UniProtKB/TrEMBL
      G3SQ46
      Related
      ENSLAFP00000022912.2, ENSLAFT00000030561.2
      Conserved Domains (4) summary
      COG5048
      Location:348 → 436
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:378 → 397
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:373 → 397
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:419 → 444
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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