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    mier3b mesoderm induction early response 1, family member 3 b [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115546089, updated on 17-Mar-2024

    Summary

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    Gene symbol
    mier3b
    Gene description
    mesoderm induction early response 1, family member 3 b
    See related
    Ensembl:ENSGMOG00000007871
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Also known as
    mier3
    Orthologs
    zebrafish all
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    Genomic context

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    See mier3b in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 6 NC_044053.1 (17139019..17147173)

    Chromosome 6 - NC_044053.1Genomic Context describing neighboring genes Neighboring gene RAB3C, member RAS oncogene family Neighboring gene polo-like kinase 2b (Drosophila) Neighboring gene elaC ribonuclease Z 1 Neighboring gene malic enzyme 2, NAD(+)-dependent, mitochondrial Neighboring gene mitogen-activated protein kinase 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044053.1 Chromosome 6 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Atlantic cod reveals a unique immune system. Star B, et al. Nature, 2011 Aug 10. PMID 21832995, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mesoderm induction early response protein 3
    Names
    MIER family member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044053.1 Reference gadMor3.0 Primary Assembly

      Range
      17139019..17147173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030359741.1 → XP_030215601.1  mesoderm induction early response protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C5BMM5
      Conserved Domains (2) summary
      cd11661
      Location:273 → 317
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:168 → 219
      ELM2; ELM2 domain

    2. XM_030359743.1 → XP_030215603.1  mesoderm induction early response protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C5BMM5
      Related
      ENSGMOP00000049267.1, ENSGMOT00000052452.1
      Conserved Domains (2) summary
      cd11661
      Location:273 → 317
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:168 → 219
      ELM2; ELM2 domain

    3. XM_030359742.1 → XP_030215602.1  mesoderm induction early response protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C5FXU0
      Related
      ENSGMOP00000068996.1, ENSGMOT00000037402.1
      Conserved Domains (2) summary
      cd11661
      Location:246 → 290
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:141 → 192
      ELM2; ELM2 domain
    Nucleotide Protein
    Heading Accession and Version

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