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    pou3f2b POU class 3 homeobox 2b [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115554703, updated on 17-Mar-2024

    Summary

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    Gene symbol
    pou3f2b
    Gene description
    POU class 3 homeobox 2b
    See related
    Ensembl:ENSGMOG00000005989
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
    human zebrafish all
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    Genomic context

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    See pou3f2b in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 11 NC_044058.1 (15253761..15257427)

    Chromosome 11 - NC_044058.1Genomic Context describing neighboring genes Neighboring gene neuroendocrine convertase 1-like Neighboring gene uncharacterized LOC115553668 Neighboring gene F-box and leucine-rich repeat protein 4 Neighboring gene failed axon connections homolog, metaxin like GST domain containing b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044058.1 Chromosome 11 Reference gadMor3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    POU domain, class 3, transcription factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044058.1 Reference gadMor3.0 Primary Assembly

      Range
      15253761..15257427
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030371516.1 → XP_030227376.1  POU domain, class 3, transcription factor 2

      UniProtKB/TrEMBL
      A0A8C4Z5Q3
      Related
      ENSGMOP00000006355.2, ENSGMOT00000006541.2
      Conserved Domains (2) summary
      smart00352
      Location:207 → 281
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:302 → 356
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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