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    Hsf4 heat shock transcription factor 4 [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105983034, updated on 13-Mar-2024

    Summary

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    Gene symbol
    Hsf4
    Gene description
    heat shock transcription factor 4
    See related
    Ensembl:ENSDORG00000015128
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    See Hsf4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267234.1 (7148546..7153832)

    NW_012267234.1Genomic Context describing neighboring genes Neighboring gene TNFRSF1A associated via death domain Neighboring gene F-box and leucine rich repeat protein 8 Neighboring gene nucleolar protein 3 Neighboring gene microtubule associated tyrosine carboxypeptidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012267234.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat shock factor protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267234.1 Reference Dord_2.0

      Range
      7148546..7153832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013012772.1 → XP_012868226.1  heat shock factor protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A1S3EUZ3
      Conserved Domains (3) summary
      smart00415
      Location:16 → 120
      HSF; heat shock factor
      pfam06546
      Location:259 → 452
      Vert_HS_TF; Vertebrate heat shock transcription factor
      pfam15035
      Location:110 → 175
      Rootletin; Ciliary rootlet component, centrosome cohesion

    2. XM_013012773.1 → XP_012868227.1  heat shock factor protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A1S3EXQ4
      Related
      ENSDORP00000014242.2, ENSDORT00000015128.2
      Conserved Domains (3) summary
      smart00415
      Location:16 → 120
      HSF; heat shock factor
      pfam06546
      Location:259 → 444
      Vert_HS_TF; Vertebrate heat shock transcription factor
      pfam15035
      Location:110 → 175
      Rootletin; Ciliary rootlet component, centrosome cohesion

    3. XM_013012775.1 → XP_012868229.1  heat shock factor protein 4 isoform X4

      UniProtKB/TrEMBL
      A0A1S3EWA7
      Conserved Domains (1) summary
      smart00415
      Location:16 → 120
      HSF; heat shock factor

    4. XM_013012774.1 → XP_012868228.1  heat shock factor protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A1S3EUY4
      Conserved Domains (2) summary
      smart00415
      Location:16 → 120
      HSF; heat shock factor
      pfam06546
      Location:259 → 418
      Vert_HS_TF; Vertebrate heat shock transcription factor

    5. XM_013012776.1 → XP_012868230.1  heat shock factor protein 4 isoform X5

      UniProtKB/TrEMBL
      A0A1S3EWD6
      Conserved Domains (2) summary
      pfam06546
      Location:199 → 384
      Vert_HS_TF; Vertebrate heat shock transcription factor
      cl12113
      Location:18 → 60
      HSF_DNA-bind; HSF-type DNA-binding
    Nucleotide Protein
    Heading Accession and Version

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