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    Zup1 zinc finger containing ubiquitin peptidase 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105998180, updated on 13-Mar-2024

    Summary

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    Gene symbol
    Zup1
    Gene description
    zinc finger containing ubiquitin peptidase 1
    See related
    Ensembl:ENSDORG00000003947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Also known as
    Zufsp
    Orthologs
    human mouse all
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    Genomic context

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    See Zup1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267373.1 (1933427..1957014)

    NW_012267373.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 162 member B Neighboring gene karyopherin subunit alpha 5 Neighboring gene rRNA-processing protein FCF1 homolog pseudogene Neighboring gene radial spoke head component 4A Neighboring gene amine sulfotransferase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012267373.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger with UFM1-specific peptidase domain protein
    Names
    zinc finger with UFM1 specific peptidase domain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267373.1 Reference Dord_2.0

      Range
      1933427..1957014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013032833.1 → XP_012888287.1  zinc finger with UFM1-specific peptidase domain protein isoform X1

      See identical proteins and their annotated locations for XP_012888287.1

      UniProtKB/TrEMBL
      A0A1S3GHD4
      Related
      ENSDORP00000003686.2, ENSDORT00000003946.2
      Conserved Domains (2) summary
      sd00017
      Location:156 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07910
      Location:330 → 545
      Peptidase_C78; Peptidase family C78

    2. XM_013032832.1 → XP_012888286.1  zinc finger with UFM1-specific peptidase domain protein isoform X1

      See identical proteins and their annotated locations for XP_012888286.1

      UniProtKB/TrEMBL
      A0A1S3GHD4
      Conserved Domains (2) summary
      sd00017
      Location:156 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07910
      Location:330 → 545
      Peptidase_C78; Peptidase family C78

    3. XM_013032831.1 → XP_012888285.1  zinc finger with UFM1-specific peptidase domain protein isoform X1

      See identical proteins and their annotated locations for XP_012888285.1

      UniProtKB/TrEMBL
      A0A1S3GHD4
      Conserved Domains (2) summary
      sd00017
      Location:156 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07910
      Location:330 → 545
      Peptidase_C78; Peptidase family C78

    4. XM_013032835.1 → XP_012888289.1  zinc finger with UFM1-specific peptidase domain protein isoform X2

      UniProtKB/TrEMBL
      A0A1S3GJ85
      Conserved Domains (2) summary
      sd00017
      Location:156 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07910
      Location:330 → 485
      Peptidase_C78; Peptidase family C78

    5. XM_013032834.1 → XP_012888288.1  zinc finger with UFM1-specific peptidase domain protein isoform X1

      See identical proteins and their annotated locations for XP_012888288.1

      UniProtKB/TrEMBL
      A0A1S3GHD4
      Conserved Domains (2) summary
      sd00017
      Location:156 → 177
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07910
      Location:330 → 545
      Peptidase_C78; Peptidase family C78
    Nucleotide Protein
    Heading Accession and Version

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