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    ZNF692 zinc finger protein 692 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100406915, updated on 10-Oct-2024

    Summary

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    Gene symbol
    ZNF692
    Gene description
    zinc finger protein 692
    See related
    Ensembl:ENSCJAG00000018739
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF692 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 19 NC_071460.1 (33871120..33890084)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 19 NC_048401.1 (34863374..34883061)

    Chromosome 19 - NC_071460.1Genomic Context describing neighboring genes Neighboring gene piggyBac transposable element derived 2 Neighboring gene 60S ribosomal protein L35a-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene zinc finger protein 672 Neighboring gene SH3 binding domain protein 5 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin insulator sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 692

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071460.1 Reference mCalJa1.2.pat.X

      Range
      33871120..33890084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054248240.1 → XP_054104215.1  zinc finger protein 692 isoform X2

    2. XM_054248238.1 → XP_054104213.1  zinc finger protein 692 isoform X1

      UniProtKB/TrEMBL
      A0A5F4WC75

    3. XM_035280986.2 → XP_035136877.1  zinc finger protein 692 isoform X1

      UniProtKB/TrEMBL
      A0A5F4WC75, F7IPR7
      Conserved Domains (4) summary
      COG5236
      Location:358 → 471
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      TIGR03835
      Location:211 → 327
      termin_org_DnaJ; terminal organelle assembly protein TopJ
      sd00017
      Location:361 → 383
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam15909
      Location:329 → 407
      zf-C2H2_8; C2H2-type zinc ribbon

    4. XM_054248239.1 → XP_054104214.1  zinc finger protein 692 isoform X1

      UniProtKB/TrEMBL
      A0A5F4WC75

    5. XM_054248241.1 → XP_054104216.1  zinc finger protein 692 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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