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    TOX2 TOX high mobility group box family member 2 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100481991, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TOX2
    Gene description
    TOX high mobility group box family member 2
    Locus tag
    PANDA_005620
    See related
    Ensembl:ENSAMEG00000003885
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See TOX2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 13 NC_048230.1 (61076620..61221145, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217481.1 (958315..1059963)

    Chromosome 13 - NC_048230.1Genomic Context describing neighboring genes Neighboring gene junctophilin-2-like Neighboring gene junctophilin-2 Neighboring gene uncharacterized LOC117795728 Neighboring gene gametocyte specific factor 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TOX high mobility group box family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048230.1 Reference ASM200744v2 Primary Assembly

      Range
      61076620..61221145 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034641484.1 → XP_034497375.1  TOX high mobility group box family member 2 isoform X4

      UniProtKB/TrEMBL
      A0A7N5KDL5
      Related
      ENSAMEP00000034245.1, ENSAMET00000033775.1

    2. XM_034641483.1 → XP_034497374.1  TOX high mobility group box family member 2 isoform X3

      UniProtKB/TrEMBL
      A0A7N5KDL5, G1LB34
      Related
      ENSAMEP00000004107.2, ENSAMET00000004274.2

    3. XM_034641486.1 → XP_034497377.1  TOX high mobility group box family member 2 isoform X5

      UniProtKB/TrEMBL
      A0A7N5KDL5

    4. XM_034641485.1 → XP_034497376.1  TOX high mobility group box family member 2 isoform X5

      UniProtKB/TrEMBL
      A0A7N5KDL5

    5. XM_019797656.2 → XP_019653215.1  TOX high mobility group box family member 2 isoform X2

      UniProtKB/TrEMBL
      D2H6K6

    6. XM_011222539.3 → XP_011220841.1  TOX high mobility group box family member 2 isoform X1

      UniProtKB/TrEMBL
      D2H6K6
      Related
      ENSAMEP00000004104.2, ENSAMET00000004271.2
      Conserved Domains (1) summary
      cd00084
      Location:255 → 320
      HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    Nucleotide Protein
    Heading Accession and Version

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