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    PER1 period circadian regulator 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100479595, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PER1
    Gene description
    period circadian regulator 1
    See related
    Ensembl:ENSAMEG00000002633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See PER1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 17 NC_048234.1 (2797113..2812038, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217758.1 (1179410..1190684)

    Chromosome 17 - NC_048234.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene vesicle associated membrane protein 2 Neighboring gene transmembrane protein 107 Neighboring gene U8 small nucleolar RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    period circadian protein homolog 1
    Names
    period circadian clock 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048234.1 Reference ASM200744v2 Primary Assembly

      Range
      2797113..2812038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034646958.1 → XP_034502849.1  period circadian protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A7N5KDE7

    2. XM_034646957.1 → XP_034502848.1  period circadian protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A7N5KDE7

    3. XM_034646956.1 → XP_034502847.1  period circadian protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A7N5KDE7

    4. XM_019801749.2 → XP_019657308.2  period circadian protein homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A7N5K9W5, A0A7N5KDE7
      Related
      ENSAMEP00000037223.1, ENSAMET00000025953.1

    5. XM_034646959.1 → XP_034502850.1  period circadian protein homolog 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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